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. 2021 Apr 13;11:8076. doi: 10.1038/s41598-021-87470-x

Table 3.

Hypothesis testing results using the chosen mean functional form for each PDX model and sp(pow) covariance structure for all PDX models.

PDX Comparison P values Conclusion
Coincident curves (2df) Intercept (AUC) Slope Quad
PH80 Diluent MK 0.0590 0.0491 0.1299 Marginal activity
Chemo  < 0.0001  < 0.0001  < 0.0001 Shows activity
Chemo + MK  < 0.0001  < 0.0001  < 0.0001 Shows activity
Chemo Chemo + MK 0.2715 0.9441 0.1038 Not better than chemo
PH87 Diluent MK 0.0989 0.2042 0.0757 Marginal activity
Chemo  < 0.0001 0.0164  < 0.0001 Shows activity
Chemo + MK  < 0.0001 0.0747  < 0.0001 Shows activity
Chemo Chemo + MK 0.7616 0.5204 0.5437 Not better than chemo
PH77 Diluent MK  < 0.0001 0.0023  < 0.0001 Shows activity
Chemo  < 0.0001  < 0.0001  < 0.0001 Shows activity
Chemo + MK  < 0.0001  < 0.0001  < 0.0001 Shows activity
Chemo Chemo + MK 0.7587 0.9648 0.4575 Not better than chemo
PH95 Diluent MK 0.9972 0.9865 0.9420 No activity
Chemo 0.0007 0.0139 0.0008 Shows activity
Chemo + MK 0.0001 0.0068 0.0002 Shows activity
Chemo Chemo + MK 0.9377 0.7845 0.7914 Not better than chemo
PH39 Diluent MK  < 0.0001 0.0005 0.0030 0.8080 Shows activity
Chemo  < 0.0001  < 0.0001 0.0021 0.9792 Shows activity
Chemo + MK  < 0.0001  < 0.0001 0.0006 0.3725 Shows activity
Chemo Chemo + MK 0.0290 0.0090 0.2309 0.0255 Improvement above chemo in mean, not growth rate

Comparisons of Chemo versus Chemo + MK assess the primary question of the study, i.e., whether addition of the PARPi MK to chemo improves the performance. Comparisons with diluent assess the secondary question of whether each arm shows activity. The test of coincident curves used 2 degrees of freedom for PH80, PH87, PH77, PH95, and 3 degrees of freedom for PH39.

PDX Patient derived xenograft, Sp(pow) Spatial(power), Chemo Chemotherapy, MK MK-4827, PARPi Polymerase inhibitor, AUC Area under the curve.