Figure S2.
Correlation of Genetics and Geography, Related to Figures 2 and S1
Outgroup f3-statistics of the form f3(Mbuti; America1, America2) for both ancient and present-day Americ an groups for all individuals with over 100,000 SNPs of coverage. (A) Heatmap of the matrix of statistics. (B) Neighbor joining tree of the matrix of inverted statistics (distances = 1/outgroup f3-statistic). (C) MDS plot of the matrix of 1-outgroup f3-statistic. (D) PCA of ancient individuals projected onto present day variation. PCA built with the “unadmixed unmasked” version of the Illumina dataset (STAR Methods); newly reported ancient individuals are projected in black outline.
