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. 2018 May 9;46(Web Server issue):W443–W450. doi: 10.1093/nar/gky357

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© The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — The success rate (A) and average number of hits per complex (B) in binding mode predictions by HPEPDOCK and pepATTRACT server for global peptide docking on the benchmark of 57 test cases when several numbers of top predictions were considered. For each number of top predictions, from left to right are HPEPDOCK with unbound structure, HPEPDOCK with homology model, and pepATTRACT server with unbound structure of the protein, respectively. The corresponding IRMSDs of individual cases are listed in Supplementary Tables S3-S5.