Figure 2.
PepComposer results for the FimG protein. The top of the figure shows the FimG target protein (PDB ID: 3BFQ) shown as a gray surface with the query region highlighted, the native peptide (with the carbon atoms shown in violet) and the top ranked designed peptide (carbon atoms in orange). The lower part shows the sequence logo of all the peptide sequences obtained from the scaffold, the amino acid sequence of the designed peptide ranking first (in orange) and of the native peptide (in violet), the PDB code of the hit protein, the FoldX binding energy of the predicted complex and the region of the selected backbone scaffold retrieved from the hit protein.