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Search result comparison of ProLuCID and Comet with half tryptic parameter. Triplicates of Hela sample were searched against the same protein database. Search results were filtered with same DTASelect parameters. The results were averaged from triplicates.
| Algorithm | Protein count | Peptide count | Spectrum count |
|---|---|---|---|
| Comet | 3940 | 28400 | 48008 |
| ProLuCID | 4124 | 33710 | 57569 |
