Figure 3. Association results from the Collaborative Study on the Genetics of Alcoholism (COGA).
A. PPARA and withdrawal B. PPARG and withdrawal C. PPARGC1A and AD. Y-axis denotes the –log10 (p-value) for association. X-axis is the physical position on the chromosome (Mb). The most significantly associated SNP is denoted with a purple symbol, and the SNP name is shown below the color scale. The extent of linkage disequilibrium (LD, as measured by r2) between each SNP and the most significantly associated SNP with the lowest p-value within the gene is indicated by the color scale. Larger values of r2 indicate greater LD. Association results with genotyped SNPs are shown as a circle while association results with imputed SNPs are shown as a square.


