Table 5.
The top 20 regions of the human genome based on the genome-wide scan on on the YRI data from HapMap III using the HMM test.
| Popul | Chr | Positions (Mb) | Genes |
|---|---|---|---|
| YRI | 6 | 33.13 – 33.26 | B3GALT4, BRD2, COL11A2, HLA, HSD17B8, RING1, RPS18, RXRB, SLC39A7, VPS52, WDR46 |
| 14 | 65.93 – 66.35 | GPHN, MGC88374, MPP5 | |
| 9 | 94.19 – 94.60 | ASPN, ANKRD19, BICD2, CENPP, ECM2, IARS, IPPK, NOL8, OGN, OMD, ZNF484 | |
| 3 | 47.60 – 48.33 | CAMP, CDC25A, CSPG5, FBXW12, NME6, PLXNB1, SCAP, SMARCC1, SPINK8, TMEM103, ZNF589 | |
| 3 | 51.17 – 51.32 | ARMET, DOCK3, RBM15B, VPRBP | |
| 4 | 52.39 – 52.45 | DCUN1D4, LOC339977, SGCB, SPATA18 | |
| 4 | 48.44 – 48.49 | FRYL, OCIAD1, OCIAD2 | |
| 7 | 65.29 – 65.48 | ASL, GUSB, KCTD7, RABGEF1, RCP9, TPST1, LOC285908 | |
| 10 | 104.57–104.63 | AS3MT, C10orf26, C10orf32, CNNM2, CYP17A1, SFXN2 | |
| 11 | 49.15– 50.03 | FOLH1, OR4C12, OR4C13 | |
| 8 | 99.83 – 99.86 | STK3, VPS13B | |
| 3 | 138.08 – 138.16 | IL20RB, NCK1, TMEM22 | |
| 4 | 100.21 – 100.28 | ADH4, ADH5, ADH6, METAP1 | |
| 8 | 113.94 – 113.94 | CSMD3 | |
| 6 | 63.92 – 63.97 | GLULD1 | |
| 14 | 59.56 – 59.57 | C14orf135 | |
| 13 | 56.55 – 56.55 | FLJ40296 | |
| 7 | 68.65 – 68.90 | AUTS2 | |
| 19 | 43.09 – 43.12 | SIPA1L3 | |
| 11 | 46.91 – 46.95 | C11orf49, CKAP5, LRP4 | |
| 1 | 172.16 – 172.18 | DARS2, RC3H1, SERPINC1, ZBTB37 | |
| 1 | 181.24 – 181.38 | C1orf14, LAMC1, LAMC2 | |
| 13 | 57.08 – 57.09 | PCDH17 |