Extended Data Table 2.
Lists of scFvs and human proteins used in the binding profiling
| ScFv # | Original mAb | Construction method | Binding target |
|---|---|---|---|
| 1-20 | Anrukinzumab | VH-linker-VL | IL13 |
| 21-40 | Ustekinumab | VH-linker-VL | IL12B |
| 41-60 | Canakinumab | VH-linker-VL | IL1B |
| 61-80 | Conatumumab | VH-linker-VL | TNFRSF10B |
| 81-100 | Ibalizumab | VH-linker-VL | CD4 |
| 101-120 | Oportuzumab | VH-linker-VL | CD326 |
| 121-140 | Otelixizumab | VH-linker-VL | CD3E |
| 141-160 | Ranibizumab | VH-linker-VL | VEGFA |
| 161-180 | Siltuximab | VH-linker-VL | IL6 |
| 181-200 | Tanezumab | VH-linker-VL | NGF |
| Human protein # | Entrez Gene symbol | Entrez Gene ID | Protein length (a.a.) |
|---|---|---|---|
| 1 | IL1B | 3553 | 270 |
| 2 | IL2 | 3558 | 154 |
| 3 | IL3 | 3562 | 153 |
| 4 | IL4 | 3565 | 154 |
| 5 | IL6 | 3569 | 212 |
| 6 | IL7 | 3574 | 178 |
| 7 | IL8 | 3576 | 100 |
| 8 | IL9 | 3578 | 145 |
| 9 | IL10 | 3586 | 179 |
| 10 | IL12B | 3593 | 328 |
| 11 | IL13 | 3596 | 147 |
| 12 | IL15 | 3600 | 163 |
| 13 | IL17A | 3605 | 156 |
| 14 | IL17B | 27190 | 181 |
| 15 | IL17F | 112744 | 164 |
| 16 | IL18 | 3606 | 194 |
| 17 | IL20 | 50604 | 177 |
| 18 | IL25 | 64806 | 178 |
| 19 | IL26 | 55801 | 172 |
| 20 | IL28A | 282616 | 201 |
| 21 | IL29 | 282618 | 201 |
| 22 | IL31 | 386653 | 165 |
| 23 | CD1A | 909 | 312 |
| 24 | CD1E | 913 | 334 |
| 25 | CD3E | 916 | 208 |
| 26 | CD4 | 920 | 459 |
| 27 | CD7 | 924 | 241 |
| 28 | CD27 | 939 | 261 |
| 29 | CD38 | 952 | 301 |
| 30 | CD40 | 958 | 278 |
| 31 | CD52 | 1043 | 62 |
| 32 | CD58 | 965 | 241 |
| 33 | CD59 | 966 | 129 |
| 34 | CD79B | 974 | 230 |
| 35 | CD74 | 972 | 233 |
| 36 | CD80 | 941 | 289 |
| 37 | CD207 | 50489 | 329 |
| 38 | CD247 | 919 | 165 |
| 39 | CD274 | 29126 | 291 |
| 40 | CD302 | 9936 | 171 |
| 41 | CD320 | 51293 | 283 |
| 42 | CD326 | 4072 | 314 |
| 43 | CNTF | 1270 | 201 |
| 44 | CSF2 | 1437 | 145 |
| 45 | CSF3 | 1440 | 201 |
| 46 | NGF | 4803 | 241 |
| 47 | NODAL | 4838 | 348 |
| 48 | OSM | 5008 | 253 |
| 49 | THPO | 7066 | 350 |
| 50 | VEGFA | 7422 | 237 |
| 51 | FASLG | 356 | 282 |
| 52 | LTA | 4049 | 206 |
| 53 | TNF | 7124 | 234 |
| 54 | TNFRSF10B | 8795 | 440 |
| 55 | TNFRSF13B | 23495 | 248 |