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. Author manuscript; available in PMC: 2015 Jul 1.
Published in final edited form as: Immunol Rev. 2014 Jul;260(1):206–220. doi: 10.1111/imr.12180

Table 1. Multiple bacterial strains contribute to colitis.

Multiple bacterial species are capable of contributing to or inducing colitis in mice depending on the experimental conditions and background strain. There is no single common species across all models, indicating that the resulting IBD depends on not only on genotype but also on the local environment, particularly the microbiota composition in different facilities.

Model Organism Mouse Strain Publication
CD45RBhi SFB + others BALB/cJHanHsd-SCID Stepankova et al. 2007
CD4-dnTgfβ × IL- 10R2−/− Bacteroides C57BL/6 Bloom et al. 2011
IL-10−/− Clostridia XIVa
Lachnospiraceae
C3H/HeJBir Duck et al. 2007
TRUC K. pneunomiae
P. mirabilis
Balb/c × Rag2−/− × Tbet−/− Garrett et al. 2007
DSS NLRP6−/− Prevotellaceae
TM7
C57BL/6 Elinav et al. 2011
IL-10−/− E.coli
E. faecalis
129S6/SvEv Kim et al. 2005