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. 2012 Nov 8;3:243. doi: 10.3389/fpls.2012.00243

Table 1.

Characteristics of reads from one lane sequencing on Illumina Solexa 1G Genome sequencer.

Chiifu-402-41 Z16 FT
Total reads 7,015,639 10,313,714 10,356,209
Aligned reads 653,057 2,721,148 1,073,449
Aligned ratio (%) 9.3 26.4 10.4
Mean read depth (-fold) 103 550 217
N50 (bp) 13,509 3997 7461

Mean read depth was calculated by including one copy of inverted repeats.