Table IV.
TaqMan real-time PCR of selected genes of interest as validation of microarrays data. The comparison LN vs. LD represents the Fold-change.
| Compartment | Gene | Microarrays | Real-time PCR | ||
|---|---|---|---|---|---|
| Fold-change | q-value | Fold-change | p-value | ||
| Tubulointerstitium | CCR1 | 1.29 | 0.004 | 2.18 | 0.047 |
| CD14 | 1.81 | 0.001 | 1.48 | 0.332 | |
| CCL5 | 1.81 | 0.001 | 12.81 | 0.049 | |
| CTSS | 1.86 | 0.000 | 10.57 | 0.001 | |
| CXCL10 | 3.01 | 0.000 | 16.20 | 0.003 | |
| STAT1 | 3.62 | 0.000 | 9.28 | 0.000 | |
| CXCR4 | 1.86 | 0.001 | 1.95 | 0.237 | |
| IRF7 | 1.66 | 0.000 | 6.99 | 0.002 | |
| HCK | 1.37 | 0.000 | 3.35 | 0.003 | |
| LYN | 1.63 | 0.000 | 2.54 | 0.009 | |
| CFB | 2.74 | 0.000 | 5.22 | 0.000 | |
| IFI44 | 10.16 | 0.000 | 22.21 | <0.0001 | |
| GPNMB | 2.10 | 0.000 | 3.36 | 0.058 | |
| Glomeruli | ITGAM | 3.21 | 0.000 | 3.82 | 0.009 |