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. 2001 Apr 10;98(9):4899–4903. doi: 10.1073/pnas.081082398

Figure 3.

Figure 3

(a) Interaction between the A patch on helix 2 (in yellow stick) with the minor groove of helix 26 (shown in surface representation). A519, A520, and A521 of helix 2 make type III, type II, and type I interactions, respectively, typical of A-patch packing geometry in the A-minor motif. (b) 5S rRNA solely interacts with 23S rRNA via a symmetric A-patch interaction between three stacked adenosines of the 5S rRNA loop E helix and three stacked adenosines in helix 38 of 23S rRNA.