Skip to main content
. Author manuscript; available in PMC: 2013 Mar 1.
Published in final edited form as: Biometrics. 2011 Aug 12;68(1):1–11. doi: 10.1111/j.1541-0420.2011.01654.x

Table 1.

The proportion of cis-eQTL among local eQTL.

p-value threshold for the TReC model 10−3 10−4 10−5 10−6
# of genes passed the TReC p-value threshold 6474 2055 838 412
# of genes with enough AS reads for cis/trans test 1093 399 174 83
# of genes with cis-eQTL by the cis/trans test 809 298 136 67
Proportion of cis-eQTL 0.740 0.747 0.782 0.807