Table I.
Meta-analysis results of 34 SNPs in HHIP region in five asthmatic populations.
| ppFEV1 | ppFVC | FEV1/FVC | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| No. | SNP | Minor (risk) Allele C/A§ |
Coordinate | Location | Pmeta* | Pmeta_C† | Pmeta_A‡ | Pmeta* | Pmeta_C† | Pmeta_A‡ | Pmeta* | Pmeta_C† | Pmeta_A‡ |
| 1 | rs4362772 | C | 145549252 | 5UTR | |||||||||
| 2 | rs749316 | G | 145590796 | 0.029 | 7.3E-03 | 0.752 | 0.046 | 0.047 | 0.597 | 0.734 | 0.437 | 0.478 | |
| 3 | rs7684769 | T | 145638960 | ||||||||||
| 4 | rs12641251 | G/A | 145644293 | ||||||||||
| 5 | rs6827794 | T | 145649747 | ||||||||||
| 6 | rs1512282 | C | 145650947 | ||||||||||
| 7** | rs6845536 | C (C) | 145672233 | 2.8E-04 | 1.1E-04 | 0.600 | 2.5E-04 | 3.2E-04 | 0.288 | 0.109 | 0.077 | 0.911 | |
| 8** | rs720485 | C (A) | 145682038 | 4.4E-04 | 2.6E-03 | 0.067 | 1.1E-04 | 1.2E-03 | 0.035 | 0.141 | 0.201 | 0.462 | |
| 9** | rs1828591 | G (A) | 145700230 | 1.5E-04 | 1.6E-03 | 0.036 | 8.6E-05 | 1.2E-03 | 0.023 | 0.175 | 0.140 | 0.901 | |
| 10** | rs1512288 | T (C) | 145710731 | 9.6E-05 | 9.5E-03 | 7.7E-04 | 3.2E-05 | 4.5E-03 | 5.1E-04 | 0.112 | 0.214 | 0.300 | |
| 11 | rs2175586 | A | 145716391 | ||||||||||
| 12 | rs1996020 | C | 145730644 | ||||||||||
| 13 | rs7670758 | A | 145731325 | 0.0 10 | 1.8E-04 | 0.149 | 6.9E-03 | 1.8E-04 | 0.224 | 0.242 | 0.090 | 0.510 | |
| 14 | rs7677662 | G | 145732503 | ||||||||||
| 15 | rs2353397 | C | 145737028 | 0.022 | 5.9E-03 | 0.820 | 0.044 | 0.012 | 0.701 | 0.086 | 0.089 | 0.640 | |
| 16 | rs4835180 | G | 145740058 | ||||||||||
| 17 | rs2035901 | G/A | 145741317 | 0.340 | 0.232 | 0.854 | 0.054 | 0.033 | 0.920 | 0.721 | 0.485 | 0.593 | |
| 18 | rs11947381 | T | 145757300 | 0.851 | 0.651 | 0.232 | 0.022 | 1.8E-03 | 0.356 | 0.097 | 0.100 | 0.651 | |
| 19 | rs2575570 | T | 145768383 | ||||||||||
| 20 | rs1398244 | T | 145781907 | 0.258 | 0.464 | 0.314 | 0.734 | 0.600 | 0.804 | 0.005 | 0.007 | 0.355 | |
| 21 | rs6845999 | T | 145785276 | ||||||||||
|
| |||||||||||||
| 22 | rs1812175 | T | 145794294 | intron | |||||||||
| 23 | rs2220514 | T | 145796008 | ||||||||||
| 24 | rs2306924 | A | 145801986 | ||||||||||
| 25 | rs6537307 | G | 145821313 | ||||||||||
| 26 | rs2575580 | C | 145824475 | 0.936 | 0.600 | 0.270 | 0.270 | 0.929 | 0.033 | 0.099 | 0.132 | 0.496 | |
| 27 | rs6537310 | T | 145856182 | 0.275 | 0.108 | 0.523 | 0.074 | 7.3E-03 | 0.240 | 0.996 | 0.934 | 0.872 | |
| 28 | rs6854783 | G | 145862529 | 0.264 | 0.107 | 0.552 | 0.055 | 7.3E-03 | 0.373 | 0.960 | 0.895 | 0.729 | |
|
| |||||||||||||
| 29 | rs11944404 | C | 145890321 | 3UTR | 0.034 | 0.142 | 0.088 | 0.297 | 0.535 | 0.300 | 0.133 | 0.211 | 0.396 |
| 30 | rs4835186 | T | 145906597 | ||||||||||
| 31 | rs2353934 | T | 145916490 | 0.446 | 0.911 | 0.173 | 0.125 | 0.516 | 0.045 | 0.928 | 0.876 | 0.922 | |
| 32 | rs12647866 | C | 145928136 | ||||||||||
| 33 | rs12651029 | A | 145989617 | 0.040 | 0.020 | 0.963 | 0.013 | 3.2E-03 | 0.822 | 0.852 | 0.651 | 0.662 | |
| 34 | rs13102609 | T | 145990671 | ||||||||||
Only rows with at least one entry with P value less than 0.05 are showed.
Pmeta is the meta-analysis P value for all five asthmatic populations.
Pmeta_C is the meta-analysis P value for three non-Hispanic White populations.
Pmeta_A is the meta-analysis P value for two African American populations.
Minor (risk) Allele C/A represents minor (risk) allele of non-Hispanic White and African American populations, respectively. Risk alleles are labeled for SNPs 7-10 only. Please refer to Table E2 and E3 for other risk alleles.
SNPs 7-10 are the four SNPs studied for strict replication since they are in strong LD with the previously identified SNP. Results from the other previously genotyped SNPs are presented for completeness but are the results of a secondary analysis.