Table 1.
Ferlin protein sequences used in this study.
| Species | Species Abbreviation | Common Name | Source | Accession |
|---|---|---|---|---|
| Non-Metazoans | ||||
| Apicomplexa | ||||
| Plasmodium falciparum | Pfal | Malaria parasite | Genbank | CAX64098 |
| Cryptosporidium parvum | Cpar | Uniprot | Q5CS58, Q5CVS8 | |
| Haptophyta | ||||
| Emiliania huxleyi | Ehux | Phytoplankton | DOE JGI | Emihu1:464146 |
| Viridiplantae | ||||
| Ostreococcus tauri | Otau | Uniprot | Q01FJ7 | |
| Metazoans | ||||
| Cnidaria | ||||
| Nematostella vectensis | Nvec | Sea anemone | Genbank | XP_001635151, XP_001628928 |
| Placozoa | ||||
| Trichoplax adhaerens | Tadh | Genbank | EDV22852, EDV22851, EDV23443 | |
| Annelida (Segmented worms) | ||||
| Capitella sp. I | Ccap | Segmented worm | DOE JGI | Capca1:169002, Capca1:184805 |
| Mollusca | ||||
| Lottia gigantea | Lgig | Gastropod snail | DOE JGI | Lotgi1:223003, Lotgi1:125050 |
| Platyhelminthes (Flat worms) | ||||
| Schistosoma mansoni | Sman | Flat worm | UniProt | C4Q6T8, C4QI48 |
| Nematoda (Round worms) | ||||
| Brugia malayi | Bmal | Round worm | UniProt | A8QEP1 |
| Caenorhabditis elegans | Cele | Round worm | UniProt | Q17388, O01596 |
| Arthropoda | ||||
| Pediculus humanus corporis | Phum | Body lice | Genbank | XP_002430476 |
| Tribolium castaneum | Tcas | Beetle | Genbank | XP_968595 |
| Acyrthosiphon pisum | Apis | Pea Aphid | Genbank | XP_001949781 |
| Drosophila melanogaster | Dmel | Fruit Fly | Genbank | NP_001137919 (Misfire isoform F) |
| Culex pipiens quinquefasciatus | Cqui | Mosquito | Genbank | XP_001858804 |
| Chordata | ||||
| Strongylocentrotus purpuratus | Spur | Sea urchin | Genbank | XP_001197550, XP_001194793, XP_001199804 |
| Branchiostoma floridae | Bflo | Lancelet | UniProt | C3Y3S6, C3XZR5, C3YBJ8 |
| Petromyzon marinus | Pmar | Lamprey | WUGSC | Contig10491, Contig10569 |
| Callorhinchus milii | Cmil | Shark | A*STAR | AAVX01058092, AAVX01535036, AAVX01036594, AAVX01262173, AAVX01071336 |
| Danio rerio | Drer | Zebra fish | Genbank/Uniprot | XP_689416, Q5SPC5, XP_687465, XP_001922278, XP_001923096, XP_001919573 |
| Mus musculus | Mmus | Mouse | Genbank/Uniprot | Q9ESD7, Q9ESF1, Q69ZN7, A3KGK3.3, *, XP_982409 |
| Homo sapiens | Hsap | Human | UniProt | O75923, Q9HC10, Q9NZM1, A9Z1Z3, A0AVI2, Q2WGJ9 |
Key: DOE JGI = Department of Energy Joint Genome Institute, A*STAR IMCB = Institute of Molecular and Cell Biology, WUGSC = Washington University Genome Sequencing Centre. * = Mmus FER1L5 was reconstructed using TBLASTN as described in methods. Sequence accession in italics indicate partial ferlin sequences.