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. 2010 Jun 23;11:340. doi: 10.1186/1471-2105-11-340

Figure 2.

Figure 2

Overview of the TOPSI pipeline. The pre-processing stage of TOPSI obtains consensus sequence segments that are common to all input genomes. The actual signature design process, including comparison with non-target genomes, is performed in the three stages of the core TOPSI pipeline. The post-processing module assembles individual unique primers and probes into PCR signatures.