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. 2009 Apr 15;25(11):1370–1376. doi: 10.1093/bioinformatics/btp244

Fig. 1.

Fig. 1.

Parallel thread block design for computing the finite-time transition probabilities P(r)(t)=EDrt E−1 for all R rate classes along all 2n−2 branches simultaneously. Example assumes that two prefetch blocks (shaded) span the matrices.