Table 3.
Comparative transcriptomic analysis of normal human epithelial melanocytes to thin primary cutaneous and metastatic melanoma samples
| Fold Higher Expression in Melanoma | Fold Lower Expression in Melanoma | ||||||
| Gene Symbol | NHEM c/t MIS/Thin | Gene Symbol | NHEM c/t Metastatic Melanoma | Gene Symbol | NHEM c/t MIS/Thin | Gene Symbol | NHEM c/t Metastatic Melanoma |
| KRT14 | 6787 | GJA1 | 759 | MME | 106 | MAP4 | 20 |
| GJA1 | 5929 | SEPP1 | 338 | CITED1 | 77 | OCA2 | 10 |
| EHF | 5487 | KRT14 | 306 | GDF15 | 64 | TRIM7 | 7 |
| SCEL | 3931 | MAGEA2 | 301 | PAEP | 47 | CITED1 | 6 |
| CLCA2 | 3689 | TRAG3 | 242 | RPEL1 | 45 | TRPM4 | 6 |
| S100A7 | 3609 | EHF | 193 | HES6 | 43 | MME | 5 |
| KRTDAP | 3416 | S100A9 | 160 | ESDN | 37 | TRAP150 | 5 |
| DSC1 | 2782 | S100A7 | 129 | QPRT | 35 | FER1L3 | 4 |
| GJB6 | 2576 | SCEL | 126 | OCA2 | 19 | QPRT | 4 |
| CXCL14 | 2484 | SLC22A3 | 125 | RENBP | 17 | KLF8 | 4 |
| LOR | 2308 | EPHA3 | 124 | NR4A3 | 16 | RPEL1 | 4 |
| KRT6A | 1989 | KRTDAP | 121 | Siat7c | 16 | PACE4 | 4 |
| PKP1 | 1835 | S100A8 | 120 | C6orf168 | 15 | HPCAL1 | 4 |
| SERPINB3 | 1778 | ZIC1 | 119 | BCL2A1 | 14 | ACTR1A | 4 |
| S100A9 | 1768 | CXCL14 | 118 | NTT73 | 14 | MET | 3 |
| KRT15 | 1545 | IL18 | 108 | PSCD3 | 14 | RAB32 | 3 |
| GATA3 | 1347 | PRAME | 102 | HPCAL1 | 13 | TYR | 3 |
| PPL | 1339 | MAGEA6 | 94.7 | MET | 12 | IRF6 | 3 |
| IMUP | 1250 | PLCB4 | 88 | ALS2CR3 | 12 | GDF15 | 3 |
| ICEBERG | 1123 | CLCA2 | 87 | PTPLA | 12 | HINT3 | 3 |
| KRT6B | 1114 | GJB6 | 85 | TBC1D7 | 11 | SLC30A1 | 3 |
| CSTA | 693 | MAGEA3 | 84 | OA1 | 11 | TRPV2 | 3 |
| CST6 | 687 | MMP19 | 59 | TYR | 11 | RSN | 3 |
NOTE: Abbreviations: NHEM: Normal Human Epithelial Melanocytes, c/t: Compared to, MIS, melanoma-in-situ, Thin, thin melanomas < 1.0 mm in Breslow's thickness