Skip to main content
. 2006 Aug 30;79(4):614–627. doi: 10.1086/507876

Table 2. .

Verification of ITPR3 SNP Genotypes[Note]

P for
 Cases
 Controls
Locus Typed in Survey Study Covered by Sequencing Chromosome 6 Position All Data Survey Dataa AA AB BB AA AB BB
rs10947415 No No 33699761 .237 ND 443 163 14 309 129 17
rs4711332 Yes No 33703376 .912 .236 12 149 466 8 117 349
rs10947418 No No 33712995 .364 ND 15 163 442 16 130 309
rs4713646 Yes No 33714500 .00200 .0851 51 255 336 22 159 297
rs12205634 Yes No 33719644 .0368 .0186 385 203 25 265 177 31
rs6457738 Yes No 33725441 .505 .195 249 304 83 173 226 72
rs1570760 Yes No 33730910 .0897 .0158 30 221 374 33 185 256
rs5875456 No No 33732282 .106 ND 29 225 373 31 178 245
rs2296343 Yes No 33734694 2.95 × 10−4 .00182 264 265 93 241 193 37
rs2296337 Yes No 33739673 1.98 × 10−4 9.12 × 10−4 92 267 281 34 194 248
rs1536036 Yes No 33739991 .0149 .00891 195 285 148 110 237 127
rs6901411 No No 33741504 6.24 × 10−4 ND 266 261 91 234 183 36
rs9357163 No Yes 33742614 .120 ND 456 142 16 308 128 13
rs12195707 No Yes 33744024 .189 ND 16 149 453 20 118 318
rs9380372 No Yes 33744210 2.12 × 10−4 ND 4 147 455 14 142 298
rs2296336 Yes Yes 33744638 1.30 × 10−6 1.70 × 10−4 107 296 240 35 217 229
rs2077163 Yes Yes 33744884 5.30 × 10−4 .00692 215 321 96 123 241 110
rs2229634 Yes Yes 33746157 6.69 × 10−6 1.82 × 10−4 100 314 236 36 216 228
rs2274198 No Yes 33746635 1.69 × 10−6 ND 116 293 207 41 212 204
rs3736893 Yes Yes 33747737 .00138 .0372 327 256 62 191 225 62
rs2274197 Yes No 33753092 .125 .0257 28 226 373 33 178 260
rs2229638 Yes No 33756205 .448 .603 472 117 6 377 76 5
rs12528378 No No 33761463 .0182 ND 45 51 516 56 39 355
rs3818521 Yes No 33765223 .123 .871 157 319 151 96 242 132
rs2229642 No No 33767449 .112 ND 137 327 171 122 234 106
rs3818527 Yes No 33769012 .181 .891 154 336 152 100 239 134
rs2281919 Yes No 33771148 .220 .240 453 161 18 319 142 16
rs2281816 Yes No 33880313 3.39 × 10−4 .0204 269 285 83 231 213 29

Note.— These data confirmed the results of our survey study—that ITPR3 is associated with T1D. An index of the allele sequences is provided at T1DBase—ITPR3.

a

ND = no data.