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. 2006 Aug;16(8):1046–1055. doi: 10.1101/gr.5273806

Table 2.

Cross-correlation of HELP results with genomic annotations

graphic file with name 1046tbl2.jpg

Substantial proportions of CpG islands and promoters fall into the methylated category, as defined by our threshold of a 0.15 centered HpaII/MspI log ratio value. In addition, a minority of repetitive sequences falls into the hypomethylated category, indicating that cytosine methylation may have a more complex intragenomic distribution than previously believed.