Table 1.
Distribution of Pax6, c-Maf, CREB, TBP, RNAP, Brg1 and Snf2h over the 16 kb of mouse αA-crystallin locus
| −10 kb | −9 kb | −8 kb (DCR1) | −7 kb | −6 kb | −4 kb | −2 kb (DCR2) | Promoter | +2 kb (Exon2) | +3 kb (DCR3) | +4 kb | +6 kb | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Pax6a | αTN4-1 | 0.00 | 0.00 | 1.61 | 0.00 | 0.04 | 0.02* | 1.19 | 1.02 | 0.00 | 0.28 | 0.00 | 0.00 |
| P1 lens | 0.08 | 0.07 | 2.66 | 0.02 | 0.08 | 0.09* | 0.00 | 1.44* | 0.07* | 0.14* | 0.09* | 0.09* | |
| c-Mafa | αTN4-1 | 0.00 | 0.00 | 1.63 | 0.01 | 0.09 | 0.05* | 0.99 | 1.16 | 0.00 | 0.43 | 0.00 | 0.00 |
| P1 lens | 0.33* | 0.04* | 0.46 | 0.21* | 0.37 | 0.21 | 0.00 | 19.53* | 3.78 | 0.28 | 0.83 | 0.00 | |
| CREBa | αTN4-1 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.01 | 0.03 | 0.42 | 0.00 | 0.04 | 0.01 | 0.01 |
| P1 lens | 0.15 | 0.07 | 0.00 | 0.24 | 0.54* | 0.00 | 0.00 | 11.38* | 4.22 | 61.26 | 0.15 | 0.04 | |
| TBP | αTN4-1 | 0.00 | 0.00 | 3.61 | 0.06* | 0.11 | 0.03 | 1.03 | 0.62 | 0.00 | 0.56 | 0.00 | 0.02 |
| P1 lens | 0.02 | 0.04 | 0.73 | 0.11 | 0.04 | 0.07 | 0.00 | 0.97 | 0.04 | 0.10 | 0.06 | 0.04* | |
| RNAP | αTN4-1 | 0.00 | 0.00 | 0.26 | 0.02 | 0.04* | 0.04* | 0.22 | 0.16 | 0.00 | 0.17 | 0.00 | 0.01 |
| P1 lens | 0.06 | 0.03 | 0.93* | 0.16 | 0.04 | 0.03* | 0.00 | 1.23 | 0.08 | 0.15 | 0.16* | 0.09 | |
| Brg1 | αTN4-1 | 0.00 | 0.00 | 0.06 | 0.00 | 0.10 | 0.00 | 0.07* | 0.13 | 0.12 | 0.08 | 0.17 | 0.06 |
| P1 lens | 3.62 | 2.62 | 0.76 | 3.44 | 0.93 | 3.27 | 0.17 | 1.61 | 0.78 | 1.30 | 2.72 | 1.88 | |
| Snf2h | αTN4 -1 | 0.00 | 0.00 | 0.05* | 0.00 | 0.09 | 0.00 | 0.06 | 2.01 | 0.04* | 0.06 | 0.03 | 0.12 |
| P1 lens | 2.09 | 2.49 | 0.41 | 1.69 | 0.49 | 1.52 | 0.36 | 0.72 | 0.53 | 0.69 | 1.87 | 1.07* | |
| The values are relative enrichments shown as 1% of the input. | |||||||||||||
| Standard deviations (SDs) of the majority of qChIP data were less than 20% of the mean values. The higher SDs (20–30% of the mean value) are indicated by asterisk. | |||||||||||||
| aBar diagrams of relative enrichments of these three factors including SDs are shown in the Supplementary data. | |||||||||||||