TABLE 2.
Summary of haplotypes, diversity, and population differentiation for European population samples
| Locus (chromosome) | Silent sites | S | h | Hd | Indels | Diversity: πsi | Diversity: θsi | DSTa | DSTb | Fsta | Nma | Fstb | Nmb |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Y25C1A.5 (II) | 657.8 | 10 | 5 | 0.749 | 12 | 0.00435 | 0.00290 | 0.00137 | 0.00217 | 0.418 | 0.35 | 0.531 | 0.22 |
| ZK430.1 (II) | 534.5 | 1 | 2 | 0.188 | 2 | 0.00035 | 0.00036 | −0.00001 | 0.00020 | 0.182 | 1.13 | 0.556 | 0.20 |
| E01G4.6 (II) | 506.4 | 13 | 4 | 0.362 | 3 | 0.00641 | 0.00491 | 0.00038 | 0.00083 | 0.078 | 2.95 | 0.160 | 1.31 |
| D1005.1 (X) | 462.8 | 1 | 2 | 0.056 | 0 | 0.00012 | 0.00041 | −0.00002 | 0.00001 | 0.080 | 2.88 | 0.154 | 1.38 |
| R160.7 (X) | 550.8 | 2 | 2 | 0.297 | 0 | 0.00108 | 0.00069 | 0.00027 | 0.00028 | 0.115 | 1.93 | 0.272 | 0.67 |
| T24D11.1 (X) | 660.0 | 1 | 2 | 0.285 | 0 | 0.00043 | 0.00029 | 0.00007 | 0.00028 | 0.044 | 5.42 | 0.880 | 0.03 |
| Concatenated | 3372.4 | 28 | 14 | 0.877 | 17 | 0.00215 | 0.00159 | 0.00039 | 0.00065 | 0.235 | 0.82 | 0.371 | 0.42 |
| Average | 562.1 | 4.67 | 2.83 | 0.323 | 2.8 | 0.00212 | 0.00159 | 0.00035 | 0.00063 | 0.153 | 2.44 | 0.425 | 0.64 |
S, segregating sites; h, haplotypes; Hd, haplotype diversity.
Assuming three populations on the basis of country of origin (France, Germany, Scotland).
Assuming seven populations on the basis of localities with more than two individuals.