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. 2006 Jan;172(1):171–184. doi: 10.1534/genetics.105.048207

TABLE 2.

Summary of haplotypes, diversity, and population differentiation for European population samples

Locus (chromosome) Silent sites S h Hd Indels Diversity: πsi Diversity: θsi DSTa DSTb Fsta Nma Fstb Nmb
Y25C1A.5 (II) 657.8 10 5 0.749 12 0.00435 0.00290 0.00137 0.00217 0.418 0.35 0.531 0.22
ZK430.1 (II) 534.5 1 2 0.188 2 0.00035 0.00036 −0.00001 0.00020 0.182 1.13 0.556 0.20
E01G4.6 (II) 506.4 13 4 0.362 3 0.00641 0.00491 0.00038 0.00083 0.078 2.95 0.160 1.31
D1005.1 (X) 462.8 1 2 0.056 0 0.00012 0.00041 −0.00002 0.00001 0.080 2.88 0.154 1.38
R160.7 (X) 550.8 2 2 0.297 0 0.00108 0.00069 0.00027 0.00028 0.115 1.93 0.272 0.67
T24D11.1 (X) 660.0 1 2 0.285 0 0.00043 0.00029 0.00007 0.00028 0.044 5.42 0.880 0.03
Concatenated 3372.4 28 14 0.877 17 0.00215 0.00159 0.00039 0.00065 0.235 0.82 0.371 0.42
Average 562.1 4.67 2.83 0.323 2.8 0.00212 0.00159 0.00035 0.00063 0.153 2.44 0.425 0.64

S, segregating sites; h, haplotypes; Hd, haplotype diversity.

a

Assuming three populations on the basis of country of origin (France, Germany, Scotland).

b

Assuming seven populations on the basis of localities with more than two individuals.