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. 2026 Oct 23;19:76. doi: 10.1186/s13041-026-01341-y

Antithetical roles of tau in hippocampal long-term synaptic depression in rats versus mice

Liam T Ralph 1,2,3,✉, Eric W Salter 1,2,4, Patrick Tidball 1,3, Brian Park 1, Sun-Lim Choi 1, Lijia Zhang 1, Meng Tian 3, Ashish Kadia 1, Fuzi Jin 1, Clarrisa A Bradley 5, Paul E Fraser 3,6, Gerold Schmitt-Ulms 3,7, Marina Gertsenstein 8, Lauryl M J Nutter 8,9, John Georgiou 1,3, Graham L Collingridge 1,2,3,✉
PMCID: PMC13692963  PMID: 42920192

Abstract

Synaptic dysfunction is a primary feature of tauopathies, a group of major neurodegenerative diseases that includes Alzheimer’s disease. However, the normal synaptic functions of tau are poorly understood. Since rats provide advantages over mice for understanding human tau, such as expressing six tau isoforms and showing more robust signs of tau pathology, as well as offering a richer behavioural repertoire, we developed a tau knockout (Mapt KO) rat line. We primarily investigated the impact of tau elimination on long-term synaptic depression (LTD)—a form of synaptic weakening that tau mediates in mice. Low-frequency stimulation of hippocampal Schaffer collateral–CA1 synapses revealed a robust enhancement of LTD in Mapt KO rats relative to WT littermates. In contrast, in interleaved experiments, Mapt KO mice exhibited reduced LTD compared to WT littermates, in line with previous reports. Together, our findings demonstrate a species-dependent role for endogenous tau in regulating hippocampal LTD, promoting it in mice yet constraining it in rats. Therefore, the functions of tau are not necessarily conserved in rodents, underscoring the importance of animal model choice.

Supplementary Information

The online version contains supplementary material available at https://doi.org/10.1186/s13041-026-01341-y.

Keywords: Tau proteins, Long-term synaptic depression, Species specificity, Synaptic plasticity, Hippocampus, Synapse loss


Tau, a microtubule-associated protein crucial for the maintenance of neuronal cytoskeletal architecture, is disrupted in tauopathies such as Alzheimer’s disease (AD) [1]. Beyond its canonical pool, tau is also present at synapses [2] where it regulates key synaptic functions [1]. Since synaptic weakening and loss of synapses are early features of AD and other tauopathies [3], understanding the synaptic roles of tau is imperative for developing more efficacious therapeutics [4]. To date, the impact of tau deletion on synaptic function has primarily been investigated in microtubule-associated protein tau homozygous knockout (Mapt−/−; Mapt KO) mice, where tau deletion results in deficits in long-term synaptic depression (LTD) in juveniles [2].

While studies have focused on the effects of tau deletion in mice, the Mapt gene exhibits considerable evolutionary divergence [5]. In the central nervous system (CNS) of humans, tau exists as six isoforms, each with distinct physiological functions and neuropathological profiles [6]. Unlike mice, rats express the same number of tau isoforms as humans, suggesting that rats may provide a better model for understanding human tau [7, 8]. Rats also more closely mimic aspects of human physiology [9] and offer a richer behavioural repertoire than mice [10], enabling more sensitive assessment of tau-dependent behaviours, while being less prone to environmental stressors [11] that drive tau phosphorylation and pathology [12]. Furthermore, there is evidence to suggest that, compared to mouse models of AD, tau pathology in rat AD models more closely resembles that of human AD patients [13], further supporting rats as a better translational model.

Synaptic weakening is relevant to neurodegenerative diseases involving tau [1, 3], and previous work has shown inhibition of hippocampal LTD in Mapt KO mice [2]. However, whether tau plays a comparable role in synaptic function in rats is unknown. To address this, we developed a constitutive rat Mapt KO line (SD-Maptem1Tcp) using CRISPR-Cas9 technology (Fig. 1A and Methods in Supplementary Materials). Sanger sequencing confirmed deletion of the fourth through fifth exon of the Mapt gene (Fig. S1A). Elimination of tau protein expression was confirmed by immunoblotting of whole-hippocampal homogenates from juvenile rats, using both an N-terminal monoclonal (Cat#: MABN2406, MilliporeSigma [14]) and a C-terminal polyclonal (Cat #: A1103, ABclonal [15]) antibody, directed against epitopes upstream and downstream, respectively, of the deleted region (Fig. 1B, C). Pups were born at expected Mendelian ratios from heterozygous breeding pairs (Fig. S1B), and Mapt KO pups exhibited no gross defects or alterations in body, brain and hippocampal mass compared to wild-type (Mapt+/+; WT) littermates (Fig. S1C–E).

Fig. 1.

Fig. 1

Opposing effects of Mapt deletion on LTD in male rats versus mice. A Schematics depicting the phylogenetic relationships between Rattus norvegicus, Mus musculus, and Homo sapiens (left), and the deleted region in the rat Mapt gene of the SD-Maptem1Tcp rat line (right). B, C Representative immunoblots (upper), total stain-free protein (middle), and quantification of tau protein levels (lower) in hippocampal homogenates from juvenile (P14–19) male Mapt+/+ (WT), and Mapt−/− (KO) rats (n = 8 per group) using (B) an N-terminal monoclonal tau (cat #: MABN2406, Millipore Sigma) and (C) a C-terminal polyclonal tau (cat #: A1103, ABclonal) antibody, with their corresponding target regions shown on the tau protein schematic in panel A in pink (17 aa from the N-terminus) and green (aa 283–441 of 2N4R tau), respectively. Tau protein levels are normalised to total (stain-free) protein levels and expressed as a percentage of WT. Tau protein expression was absent in Mapt KO rats relative to WTs. Comparisons were made using unpaired two-tailed Student’s t-tests. D–F Time course of LFS-induced LTD (900 pulses delivered at 1 Hz) in WT (closed symbols) and Mapt KO (open symbols) male (D) rats (blue circles), and (E) mice (purple hexagons). Expanded regions of the time plots show the final 20 min of recordings. Representative traces show superimposed fEPSPs from the baseline period (solid blue/purple lines) and the end of the recording session (red dashed line). Levels of LTD (F) were calculated as the percent change in fEPSP slope from baseline in the last 6 min of recordings. Comparisons were made using two-way ANOVA followed by Šídák’s post hoc test. Detailed statistics are shown in Supplementary Tables 1 and 2. All data are presented as the mean ± S.E.M. **P < 0.01; ****P < 0.0001

To assess synaptic weakening in this model, we examined low-frequency stimulation (LFS)-induced LTD in the CA1 region of acute ex vivo hippocampal slices prepared from juvenile male Mapt KO rats and their male WT littermates. We also examined LFS-LTD in slices from juvenile male Mapt KO mice and their male WT littermates in interleaved experiments. Surprisingly, we found that the impact of tau deletion on LTD depended on rodent species (two-way ANOVA: species × genotype interaction, F(1,26) = 30.5, p < 0.0001). Specifically, LTD was significantly enhanced in male Mapt KO rats (40.3 ± 3.1%, n = 6) relative to WT littermate controls (22.0 ± 4.3%, n = 6; t(26) = 4.0, p = 0.002, Šídák’s post-hoc test, Fig. 1D, F). In contrast, LTD was reduced in male Mapt KO mice (14.9 ± 2.5%, n = 9) relative to WT littermates (29.4 ± 2.2%, n = 9; t(26) = 3.9, p = 0.003, Fig. 1E, F), consistent with previous findings [2], and differed significantly from the augmented LTD obtained in male Mapt KO rats (t(26) = 6.0, p < 0.0001). LTD levels between male WT mice and rats were similar (t(26) = 1.8, p = 0.3). Together, these findings indicate that tau has an opposite role in LTD dependent on rodent species, facilitating LTD in mice and constraining LTD in rats.

Our interleaved experiments using male rats and mice confirm that this is a bona fide species difference rather than a difference in experimental conditions. The reason for this species difference remains unknown and could be attributable to several factors. One plausible explanation is that it arises from the function of a tau isoform that rats possess but mice do not (e.g., 1N3R/2N3R) since isoforms are known to have unique roles [6]. Extrinsic factors, such as differences in how rats and mice handle or respond to stress [11] for which tau has been shown to play a role in mice [12], could also contribute. A third plausible explanation relates to intrinsic factors, such as different expression levels of synaptic plasticity genes in dendrites including calcium/calmodulin-dependent protein kinase II (CaMKIIβ), neurogranin, and several synaptotagmin isoforms [9]. Thus, the underlying mechanisms of induction and/or expression of LTD may differ between these rodent species.

Our interest in studying tau deletion in rats stems from the evolutionary divergence in tau isoform expression [5]. Specifically, like humans, juvenile rats express all six CNS tau isoforms, and this persists into adulthood [7, 8]. In contrast, juvenile mice predominantly express the 0N3R isoform, which wanes with age, as well as the 0N4R tau isoform, which increases alongside 1N4R and 2N4R into adulthood [8], while expression of 1N3R and 2N3R isoforms is lacking [6]. These differences may be critical since different tau isoforms stabilise microtubules to different extents, have unique interaction partners related to synaptic function, and have distinct sub-cellular localisation patterns [6]. As such, rats are increasingly being used to study tauopathies. For instance, recent findings in male rats demonstrate that acute intracerebroventricular injection of oligomer-enriched tau facilitates LTD while fibril-derived soluble tau aggregates inhibit LTD [16]. Therefore, the generation of our Mapt KO rat line (SD-Maptem1Tcp) offers a useful tool for studying the role of endogenous tau in AD and other neurodegenerative diseases.

Future experiments should consider (i) whether this species difference is also present in female rodents, given that sex differences in tau phosphorylation have been reported in rats [17], and (ii) how tau deletion impacts synaptic plasticity, learning and memory with age since the ratio of tau isoform expression [7, 8] and post-translational modifications [1] change across the lifespan. Indeed, tau deletion has been shown to not impact LTD induced by a stronger LFS protocol (2 Hz, 1800 pulses) in 6-month-old adult mice [18]. This may reflect the decline in LTD magnitude and a change of underling mechanism with age [19, 20]. Whether tau loss-of-function nonetheless reactivates LTD pathways in the context of tau pathology, and whether this differs between sexes or with age in rats, remains to be shown. In conclusion, the species difference we report here highlights the importance of selecting the most appropriate animal model for investigating the physiological and pathological functions of tau in relation to human health and disease.

Supplementary Information

Acknowledgements

We thank Dr. John G. Howland for reading the manuscript and providing feedback. The authors would like to thank the staff of the Model Production Core at The Centre for Phenogenomics (TCP) for excellent technical assistance during rat model production. We are grateful to Dr. Michael Salter and Janice Hicks for their initial support in maintaining the Mapt KO rat line. Portions of the study were published in the PhD thesis of L.T.R. (University of Toronto, 2024) and presented in conference abstracts and in a 2025 bioRxiv preprint (https://doi.org/10.1101/2025.08.07.665155).

Abbreviations

ACSF

Artificial cerebrospinal fluid

AD

Alzheimer’s disease

ANOVA

Analysis of variance

Cas9

CRISPR-associated protein 9

CNS

Central nervous system

CRISPR

Clustered regularly interspaced short palindromic repeats

fEPSP

Field excitatory postsynaptic potential

KO

Knockout

LFS

Low-frequency stimulation

LTD

Long-term synaptic depression

LTP

Long-term potentiation

Mapt

Microtubule-associated protein tau (gene)

WT

Wild-type

Author contributions

L.T.R., G.L.C., E.W.S., P.T., and J.G. wrote the manuscript and designed the experiments. L.T.R. performed and analyzed electrophysiology recordings with support from E.W.S., P.T. and M.T.. Immunoblotting experiments were performed and analyzed by B.P. and L.T.R. with support from S.C.. Genotyping and blinding was performed by L.Z., A.K., and F.J.. The Mapt KO rat line was generated by L.M.J.N. and M.G. Project guidance was provided by G.S.U., P.E.F, and C.A.B. All authors discussed the findings and edited the manuscript.

Funding

The research was funded by a CIHR (Canadian Institutes of Health Research) Foundation Grant #154276 to G.L.C. and a Project Grant (PJT-173497) to P.E.F. We thank the Dani Reiss Family Foundation (Neurodegeneration and Aging Research Program) as well as Butch Mandel for their respective support. Generation of tau (SD-Maptem1Tcp) knockout rat line was funded in part by Genome Canada and Ontario Genomics (OGI-137). G.L.C. is the holder of the Krembil Family Chair in Alzheimer’s Research. We also thank the Peterborough K.M. Hunter Charitable Foundation for providing funding support to L.T.R during this project.

Data availability

All datasets are available from the corresponding authors upon reasonable request.

Declarations

Ethics approval and consent to participate

All experiments were approved and conducted in compliance with UHN animal use protocols, with oversight from The Centre for Phenogenomics (TCP) and in accordance with the guidelines of the Canadian Council on Animal Care (CCAC).

Consent for publication

Not applicable.

Competing interests

J.G. and G.L.C. are Editorial Board Members for Molecular Brain. Other authors declare no competing interests.

Footnotes

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Contributor Information

Liam T. Ralph, Email: liam.ralph@mail.utoronto.ca

Graham L. Collingridge, Email: collingridge@lunenfeld.ca

References

  • 1.Parra Bravo C, Naguib SA, Gan L. Cellular and pathological functions of tau. Nat Rev Mol Cell Biol. 2024;25(11):845–64. 10.1038/s41580-024-00753-9. [DOI] [PubMed] [Google Scholar]
  • 2.Kimura T, Whitcomb DJ, Jo J, Regan P, Piers T, Heo S, et al. Microtubule-associated protein tau is essential for long-term depression in the hippocampus. Philos Trans R Soc B Biol Sci. 2014;369(1633):20130144. 10.1098/rstb.2013.0144. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Watamura N, Foiani MS, Bez S, Bourdenx M, Santambrogio A, Frodsham C, et al. In vivo hyperphosphorylation of tau is associated with synaptic loss and behavioral abnormalities in the absence of tau seeds. Nat Neurosci. 2024;28(2):293–307. 10.1038/s41593-024-01829-7. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.Dejanovic B, Sheng M, Hanson JE. Targeting synapse function and loss for treatment of neurodegenerative diseases. Nat Rev Drug Discov. 2024;23:23–42. 10.1038/s41573-023-00823-1. [DOI] [PubMed] [Google Scholar]
  • 5.Sündermann F, Fernandez MP, Morgan RO. An evolutionary roadmap to the microtubule-associated protein MAP Tau. BMC Genomics. 2016. 10.1186/s12864-016-2590-9. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.Buchholz S, Zempel H. The six brain-specific TAU isoforms and their role in Alzheimer’s disease and related neurodegenerative dementia syndromes. Alzheimers Dement. 2024;20(5):3606. 10.1002/ALZ.13784. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Hanes J, Zilka N, Bartkova M, Caletkova M, Dobrota D, Novak M. Rat tau proteome consists of six tau isoforms: Implication for animal models of human tauopathies. J Neurochem. 2009. 10.1111/j.1471-4159.2009.05869.x. [DOI] [PubMed] [Google Scholar]
  • 8.Tuerde D, Kimura T, Miyasaka T, Furusawa K, Shimozawa A, Hasegawa M, et al. Isoform-independent and-dependent phosphorylation of microtubule-associated protein tau in mouse brain during postnatal development. J Biol Chem. 2018. 10.1074/jbc.M117.798918. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Francis C, Natarajan S, Lee MT, Khaladkar M, Buckley PT, Sul JY, et al. Divergence of RNA localization between rat and mouse neurons reveals the potential for rapid brain evolution. BMC Genomics. 2014. 10.1186/1471-2164-15-883. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 10.Parker CC, Chen H, Flagel SB, Geurts AM, Richards JB, Robinson TE, et al. Rats are the smart choice: rationale for a renewed focus on rats in behavioral genetics. Neuropharmacology. 2014;76:250–8. 10.1016/j.neuropharm.2013.05.047. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 11.Ellenbroek B, Youn J. Rodent models in neuroscience research: Is it a rat race? DMM Dis Models Mech. 2016. 10.1242/dmm.026120. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Lopes S, Vaz-Silva J, Pinto V, Dalla C, Kokras N, Bedenk B, et al. Tau protein is essential for stress-induced brain pathology. Proc Natl Acad Sci U S A. 2016. 10.1073/pnas.1600953113. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 13.Do Carmo S, Cuello AC. Modeling Alzheimer’s disease in transgenic rats. Mol Neurodegener. 2013. 10.1186/1750-1326-8-37. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Combs B, Hamel C, Kanaan NM. Pathological conformations involving the amino terminus of tau occur early in Alzheimer’s disease and are differentially detected by monoclonal antibodies. Neurobiol Dis. 2016. 10.1016/j.nbd.2016.05.016. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Wu L, Gilyazova N, Ervin JF, Wang SHJ, Xu B. Site-Specific phospho-tau aggregation-based biomarker discovery for AD diagnosis and differentiation. ACS Chem Neurosci. 2022;13(23):3281–90. 10.1021/acschemneuro.2c00342. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Yang Y, Ondrejcak T, Hu NW, Klyubin I, Rowan MJ. Divergent disruptive effects of soluble recombinant tau assemblies on synaptic plasticity in vivo. Mol Brain. 2025;18(1):36. 10.1186/s13041-025-01208-8. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Niu J, Iqbal K, Liu F, Hu W. Rats Display sexual dimorphism in phosphorylation of brain tau with age. J Alzheimers Dis JAD. 2021;82(2):855–69. 10.3233/JAD-210341. [DOI] [PubMed] [Google Scholar]
  • 18.Ahmed T, Van der Jeugd A, Blum D, Galas MC, D’Hooge R, Buee L, et al. Cognition and hippocampal synaptic plasticity in mice with a homozygous tau deletion. Neurobiol Aging. 2014. 10.1016/j.neurobiolaging.2014.05.005. [DOI] [PubMed] [Google Scholar]
  • 19.Collingridge GL, Peineau S, Howland JG, Wang YT. Long-term depression in the CNS. Nat Rev Neurosci. 2010;11(7):459. 10.1038/nrn2867. [DOI] [PubMed] [Google Scholar]
  • 20.Kamal A, Biessels GJ, Gispen WH, Urban IJ. Increasing age reduces expression of long-term depression and dynamic range of transmission plasticity in CA1 field of the rat hippocampus. Neuroscience. 1998;83(3):707–15. 10.1016/s0306-4522(97)00394-1. [DOI] [PubMed] [Google Scholar]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Data Availability Statement

All datasets are available from the corresponding authors upon reasonable request.


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