Table 4.
MAPTH1 Subhaplotype Frequencies in PD Cases and Controls
|
Frequency (n) among |
||
| H1 Subhaplotypea(Allelic Conformation) | Controls | PD Cases |
| I (GGTACGCGT) | .16 (26) | .22 (35) |
| II (GGCGTGTGT) | .09 (14) | .08 (13) |
| III (GGTACGTGT) | .06 (9) | .04 (7) |
| IV (AGTACGCGT) | .05 (8) | .06 (10) |
| V (AACACATGC) | .05 (8) | … |
| VI (AACATGCAT) | .04 (7) | … |
| VII (GGCACATGC) | .04 (6) | … |
| VIII (GGTATGCAC) | .03 (5) | … |
| IX (GGCACGCGT) | .03 (5) | … |
| X (GGTATGCAT) | .03 (5) | … |
| XI (GGCGTGCGT) | .02 (3) | … |
| XII (AACGTGTGT) | … | .08 (12) |
| XIII (GGCACACGC) | … | .04 (6) |
| XIV (AACACATGT) | … | .03 (5) |
| XV (GGCATGCGT) | … | .03 (4) |
| XVI (GGCACGTGT) | … | .02 (4) |
| XVII (GGCATATAC) | … | .02 (3) |
a
H1 subhaplotypes are comprised of “haplotype tagging” H1-SNPs 7-8-9-10-11-1-14-3-4.