TABLE 4.
Characterization of strains with newly described MLST alleles or sequence types
| New ST | No. of strains | Strain no. | Allele
|
Closest ST(s) | Closest ST clonal complex | Possible different allele(s) (close to allele no.) | Nucleotides different | New Oxford database allele number | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| aspA | glnA | gltA | glyA | pgm | tkt | uncA | ||||||||
| 925 | 2 | 99-7040 | 2 | 25 | 12 | 3 | 2 | 1 | 5 | 31, 50, 387, 536 | 21 | gln | ||
| 99-7046 | ||||||||||||||
| 926 | 1 | 00-2846 | 2 | 20 | 1 | 3 | 140 | 3 | 5 | 806 | 21 | gln | ||
| 927 | 1 | 00-2848 | 2 | 1 | 1 | 19 | 140 | 3 | 5 | 806 | 21 | gly | ||
| NT 1 | 1 | 00-3477 | 1 | 2 | 3 | 4 | 5 | 9 | NT | 42 | 42 | unc (3) | nt 234 G > A | unc-71 |
| 941 | 1 | 00-2587 | 42 | 63 | 2 | 66 | 6 | 1 | 5 | 35, 38, 476, 804 | 48 | gln | ||
| 928 | 2 | 00-2814 | 9 | 2 | 4 | 62 | 4 | 5 | 38 | 257, 560 | 257 | unc | ||
| 00-2816 | ||||||||||||||
| 929 | 1 | 00-6389 | 9 | 2 | 4 | 62 | 4 | 5 | 17 | 257, 560 | 257 | unc | ||
| 930 | 1 | 00-1597 | 7 | 2 | 5 | 2 | 2 | 3 | 6 | 5, 404 | 353 | gln, pgm | ||
| 931 | 1 | 00-4221 | 8 | 17 | 5 | 2 | 11 | 59 | 6 | 400 | 353 | pgm | ||
| 932 | 1 | 00-1467 | 10 | 27 | 59 | 19 | 10 | 79 | 7 | 403, 435, 552, 556, 557, 605 | 403 | glt, gly, tkt | ||
| 933 | 3 | 00-2817 | 10 | 1 | 59 | 19 | 10 | 5 | 7 | 285, 403, 435, 493, 552 | 403 | gln, glt, gly, tkt, unc | ||
| 00-2818 | ||||||||||||||
| 00-2843 | ||||||||||||||
| 934 | 1 | 00-3449 | 1 | 1 | 59 | 2 | 10 | 5 | 7 | 552 | 403 | asp, gln, gly | ||
| NT 2 | 1 | 00-2575 | 33 | NT | 30 | 82 | 104 | 43 | 17 | 828 | gln (39) | nt 39 C > T | ||
| 935 | 1 | 00-2810 | 33 | 39 | 30 | 115 | 104 | 35 | 42 | 826, 855, 893 | gly, unc | |||