Abstract
Infiltration of CD3+CD8+ cytotoxic T cells was analyzed by multiparameter confocal laser microscopy in a panel of 16 randomly selected stage I nonsmall cell lung carcinomas. T-cell infiltration was observed in the stroma (range 57-,093 T cells/mm2) but also in the tumor epithelium (range 21-92 T cells/mm2) and showed wide variation between individual tumors. Interestingly, a significantly higher percentage of CD3+CD8+ T cells was detected in the tumor epithelium compared to the stroma illustrating that cytotoxic T cells may preferentially migrate into tumor epithelium. Aberrant HLA class I antigen expression was observed in 69% of the nonsmall-cell lung carcinoma (NSCLC) tumors. One tumor of a squamous cell lung carcinoma patient with the highest number of tumor infiltrating CD3+ and CD3+CD8+ cells was studied in detail and the majority (90%) of these cells were shown to be functionally activated granzyme B-positive cytotoxic T cells. DNA oligotyping of a lung carcinoma cell line established from this tumor revealed loss of one HLA haplotype corresponding with a translocation involving chromosome 6, as observed by COBRA-FISH. HLA class I-restricted tumor specific T cells could be isolated from PBMC. One further characterized cytotoxic CD8+ T cell clone, that released TNF-α, IFN-γ, and granzyme B upon co-incubation with the autologous tumor cells, was shown to be restricted by the remaining HLA-A11 allele, which was also shown to be expressed in the tumor tissue. Our data indicate that, despite HLA-haplotype loss a vigorous antitumor immune response mediated by CD8+ T-cells can be present in NSCLC offering possibilities for specific immunotherapy.
Keywords: Cytotoxic T cells, Infiltrate, Lung cancer, Granzyme B, HLA class I molecules
Introduction
Lung carcinoma represents one of the leading causes of malignancy-related death. Despite treatment modalities such as chemotherapy and radiotherapy, the prognosis of nonsmall-cell lung carcinoma (NSCLC) remains poor in patients with an advanced stage of the disease. Several reports describe conflicting conclusions with respect to the prognostic value of immune infiltrate in lung cancer [7, 15, 32, 40]. These discrepancies may result from variable methods used for evaluation of the immune infiltrate that either do or do not distinguish between different type and activation state of infiltrating immune cells or their actual localization, i.e. in the tumor epithelium or surrounding stroma.
Tumor infiltrating lymphocytes play a key role in immunosurveillance against aberrant malignant cells and the formation of tumors is hypothesized to involve induction of tumor cells that have escaped the immune system. Several mechanisms of immune evasion have been reported, including downregulation of MHC class I molecules, formation of Ag loss variants, secretion of immune suppressive factors such as TGF-beta and IL-10 and mutations or loss of factors involved in the apoptosis pathway (reviewed in [36]).
Loss of HLA class I expression is frequently observed in many human cancers [9]. The suggestion that loss of HLA class I expression plays an important role in immune escape of tumor cells is illustrated by the highly significant association between the loss of HLA class I expression in lung carcinomas and the undifferentiated and biologically aggressive phenotype of the tumor [31]. A role of HLA class I loss in disease progression by escaping immune surveillance is further supported by the substantial number of premalignant lesions of esophageal carcinoma displaying complete HLA class I loss [28] and the fact that allele-specific HLA class I loss is observed more frequently in lymph node metastases compared to primary cervical tumors from the same patients [12]. Downregulation of HLA class I molecules or the appearance of Ag loss variants both play a role at the level of recognition of tumor cells by immune effector cells. In addition, tumor cells may escape T cell-mediated cytotoxicity via inhibition of one of the two major mechanisms that are triggered following T cell-mediated recognition of target cells, i.e. the secretory pathway involving receptor-triggered exocytosis of preformed secretory granules and the T cell-receptor-induced surface expression of Fas-ligand (FasL) on effector cells, which cross-links Fas receptor (CD95, Apo-1) on target cells initiating caspase activation, eventually leading to apoptosis.
In this study, the type and localization of immune infiltrating cells has been analyzed in a panel of 16 NSCLC tumors with either squamous cell carcinoma or adenocarcinoma histology. One lung carcinoma with the highest numbers of tumor- and stroma-infiltrating immune cells was studied in detail by in situ staining for functionality of infiltrated T cells and the generation of a CTL clone.
Materials and methods
Lung cancer patient
The primary tumor of a 63-year-old male patient KLP11 (HLA-A11, HLA-A24, HLA-B7, HLA-B57, HLA-Cw6, HLA-Cw7) with a squamous cell carcinoma of the lung was resected and a stable cell line, designated KLP11, was established by mincing the tumor sample into small pieces of approximately 1 mm3 and culturing the adherent cells in DMEM (Life Technologies, Breda, The Netherlands) with 8% heat inactivated FCS, penicillin (100 μg/ml), streptomycin (100 μg/ml), and l-glutamine (2 mM). Peripheral blood mononuclear cells (PBMC) were isolated from venous blood after Ficoll-gradient separation. HLA typing of the patient’s PBMC and tumor cell line KLP11 was performed by standard serological techniques as well as by PCR/oligotyping as described elsewhere [44]. Appropriate informed consent and approval by the local Medical Ethical Committee was obtained.
Cell lines and culture
Lung carcinoma cell lines GLC-2, GLC-8, GLC-36 were kindly provided by Dr. L. de Leij (Pathology and Laboratory Medicine, University Hospital Groningen, The Netherlands). Breast carcinoma cell lines MDL-13E, MDA-MB-134, MDA-MB-231, MCF-7, ZR75.1, BT549, and the natural killer target cell line K562 were obtained from the American Tissue Culture Collection (ATCC, Manassas, VA, USA). The renal cell carcinoma (RCC) cell line MZ1774–RCC was provided by Dr. B. Seliger (Johannes Gütenberg University, Mainz, Germany). The melanoma cell line MEWO was provided by Mrs. M. Wilke (Immunohaematology, Leiden University Medical Center, The Netherlands) and the melanoma cell line 93.03A, the RCC cell line RCC90.03, and the ovarian carcinoma cell line COV504 were established in our laboratory. All cell lines were cultured in DMEM with 8% heat inactivated FCS, antibiotics and l-glutamine, as described above.
EBV-transformed B-lymphoblastic cell lines (EBV) were generated from PBMC of the lung cancer patient (EBV-KLP11) and normal healthy donors (EBV-OU, EBV-RU, EBV-RO). These newly generated EBV, the previously established EBV-JY and the Fas-positive EBV SKW6.4 and the TNF-sensitive WEHI-164 clone 13 cells (obtained from P. Coulie, University of Louvain, Brussels, Belgium) were all cultured in RPMI 1640 medium with 5% heat inactivated FCS and l-glutamine and antibiotics as described above. HLA typing of all cell lines was obtained by PCR/oligotyping.
Flow cytometric analysis
Cell surface expression of HLA class I antigens, tumor-associated Ag, and apoptosis-related molecules was studied by FACS analysis using the following primary antibodies: anti-HLA-class I murine mAb W6/32 (anti-HLA-A, anti-HLA-B, and anti-HLA-C) [25], the human anti-HLA-A11 mAb OK2H12 (IgM, anti-HLA-A11, anti-HLA-A3, anti-HLA-A36, anti-HLA-A32, kindly provided by Dr. A Mulder, Leiden University Medical Center). Antibodies against tumor associated Ag: anti-Her-2 mAb 9G6 [42], Muc-1 mAb 214D4 (a gift from Dr. J. Hilken, NKI Amsterdam, The Netherlands), EpCAM-1 (Ber-Ep4, Dako) and antibodies against apoptosis-related molecules anti-Fas/CD95 mAb APO-1 (mouse IgG1, a kind gift from Dr. P. Krammer, German Cancer Research Center, Heidelberg, Germany) and SM1/23 (Fab-fragments mouse IgG2b, Alexis, Lausanne, Switzerland) an apoptosis blocking anti-Fas mAb.
MAbs against HLA-A11 (0284HA) and HLA-A24 (0041HA) (One Lambda Inc., Canoga Park, CA, USA) were used for immunohistochemical staining as described [13] after confirmation of their specificity by FACS analysis.
The CTL clone was phenotyped with FITC-conjugated anti-CD3 mAb and PE-conjugated anti-CD4 or anti-CD8 mAb (BD Bioscience, Alphen aan den Rijn, The Netherlands), respectively, and TCR analysis was performed using the TCR Vβ repertoire kit (Beckman Coulter), according to the manufacturer’s instructions. Expression of NK inhibitory and activating receptors on CTL21/74 was studied by FACS analysis using a panel of PE-conjugated mouse-anti-human mAb including GL183 (IgG1, anti-CD158b1/b2,j, Beckman Coulter), EB6B (IgG1, anti-CD158a,h, Beckman Coulter), DX-9 (IgG1, anti-NKB1, BD Pharmingen), FES172 (IgG2a, anti-CD158i, Beckman Coulter), HP-3D9 (IgG1, anti-CD94 /Kp43, BD Pharmingen), and NKG2D (IgG1, anti-NKG2D, R&D Systems, Abingdon, UK).
COBRA-FISH
To describe the karyogram of the lung cancer cell line KLP11 we prepared slides with cells treated with colcemid and KCl in order to get metaphase spreads. The cells were harvested and fixed according to standard procedures. We performed COBRA-FISH as previously described by Wiegant et al. [45] with a hybridization time of 2- days. Three fluorochromes were used to ratio-label pair wise two sets of 12 whole chromosomal paints (WCP). A fourth binary fluorochrome was added to distinguish the two sets of ratio-labeled WCP specific for either the even or the odd chromosomes. A fifth binary fluorochrome was used to label chromosome arm-specific probes (PQ-COBRA-FISH). Fluorescence filters and imaging and image processing were used as described previously [45]. Per passage of the cell line 15 metaphases were analyzed.
RNAse protection assay
Messenger RNA expression for apoptosis-related proteins was determined by the RiboQuant RNAse protection assay (Pharmingen/BD Bioscience) using the hAPO-3 and hAPO-5c multi-probe sets, according to the manufacturer’s instructions.
Immunohistochemistry
Immunohistochemistry was performed on formalin fixed, paraffin embedded sections (unless stated otherwise) following standard procedures and after Ag retrieval if appropriate by boiling for 2 h in citrate buffer (10 mM, pH 6.0) in a microwave. For detection the ABC system (Dako) was used, i.e. biotinylated secondary mAb and streptavidin-HRP followed by incubation with 3,3-diaminobenzidine/H2O2 (DAB) substrate to visualize positive staining. For staining of HLA class I molecules, HCA2 and HC10 mAb (generous gift of Jacques Neefjes, NKI, Amsterdam, The Netherlands) were used. HCA2 recognizes β2m-free HLA-A (except A24), HLA-B7301 and HLA-G and HC10 recognizes all β2m-free HLA-B, HLA-C and in addition HLA-A10, A28, A29, A30, A31, A32, and A33 [17, 26, 37, 38]. MAbs against HLA-A11 (0284HA) and HLA-A24 (0041HA) (One Lambda Inc.) were used to determine HLA-A24 loss in KLP11 primary tumor tissue. For Ag retrieval these sections were incubated in 0.1% trypsin in CaCl2 (0.1%, pH 7.4) for 10 min at 37°C in an incubator with 5% CO2 as described by Hiraki et al. [13]. As a positive control expression of the epithelial cell marker cytokeratin (Mon3003, Monosan, Uden, The Netherlands) was studied in KLP11 tumor tissue and as a negative control mouse IgG1 (Dako) was used.
CD2 and CD3 mAb (Dako) were used to detect T-cell infiltration, and PI9-17 mAb (kindly provided by A. Kummer, University Medical Center Utrecht, The Netherlands) was used to detect expression of the serine protease inhibitor PI-9 in tumor tissue of KLP11, as previously described [3]. Apoptosis of KLP11 tumor cells in vivo was studied in KLP11 tumor tissue using mAb M30 (Roche Molecular, Indianapolis, IN, USA) as described [20].
Tumor-associated antigens anti-Her-2 mAb 9G6, anti-Muc-1 mAb 214D4, anti-EpCAM-1 mAb Ber-Ep-4, and p53 mAb DO-7 (Dako), apoptosis-related factors, caspase-3 pAb 67341A (BD Pharmingen, San Diego, CA, USA), caspase-7 pAb Asp198 (rabbit pAb, Cell Signaling Technology Inc., Beverly, MA, USA) and apoptosis inhibitory factors XIAP mAb H62120 (mouse IgG1, Transduction Labs, Lexington, KY, USA), cIAP-1 pAb AF818 (rabbit pAb, R&D Systems, Minneapolis, MN, USA), c-IAP-2 pAb AF817 (rabbit pAb, R&D Systems), survivin (rabbit pAb, R&D Systems) were analyzed on acetone fixed KLP11 cells grown on glass cover slips.
Detailed investigation of tumor infiltrating immune cells was performed on formalin fixed, paraffin embedded sections by multiparameter confocal laser microscopy essentially as described by Sandel et al. [34]. For the immunogold staining of keratin anti-cytokeratin AE1/AE3 (IgG1, Dako) and Ultra Small Gold-labeled goat-anti-mouse (IgG, Aurion) were used. Polyclonal rabbit-anti-human-CD3 Ab ab828 (Abcam, Cambridge, UK), mouse-anti-human-CD8 mAb 4B11 (IgG2b, Novo Castra, Newcastle Upon Tyne, UK), and mouse-anti-human-CD57 mAb HNK-1 (IgM, hybridoma supernatant, ATCC, Manassas, VA, USA), and as secondary Abs goat-anti-rabbit IgG-Alexa-546, goat-anti-mouse-IgG2b-Alexa-647, and goat-anti-mouse-IgM-Alexa-488 (Molecular Probes, Leiden, The Netherlands) were used. The presence of granzyme B positive T cells was analyzed after staining of tumor sections with a cocktail of mouse-anti-human granzyme B (GrB7, IgG2a, Sanbio, Uden, The Netherlands), mouse-anti-human-CD3 and mouse-anti-human-CD-8 mAb and fluorescence-labeled secondary Abs consisting of goat-anti-rabbit IgG-Alexa-546, goat-anti-mouse-IgG2a-Alexa-647, and goat-anti-mouse-IgG2b-Alexa-488. Each fluorochrome was given an artificial color: Alexa-488-green, Alexa-546-red, and Alexa-647-blue.
Mixed lymphocyte tumor cell cultures and CTL cloning
Mixed lymphocyte tumor cell cultures (MLTC) were performed as described [43]. Lung carcinoma cell line KLP11 was incubated with 100 U/ml recombinant human IFN-γ (IFN-γ, Bender Medsystems GmbH, Vienna, Austria) for 48 h at 37°C to obtain maximal HLA class I expression, as determined by FACS analysis after staining with mAb W6/32 (1 μg/ml) followed by staining with the detecting goat-anti-mouse-FITC mAb. These cells were lethally irradiated (100 Gy) before use as stimulator cells in the MLTC. Reactivity of the bulk cultures was assessed weekly, starting from day 21, in a cytotoxicity assay. Reactive CTL clones were obtained from lytic bulk cultures by limiting dilution performed at week 6 as described [43].
Cytotoxicity and apoptosis assay
Cytotoxicity was measured with a standard 51Cr-release assay. When mentioned, IFN-γ-stimulated, 51Cr-labeled target cells were incubated with blocking mAb for 30 min at 37°C and further diluted prior to incubation with effector cells for 4 h at 37°C. Blocking mAb was used in previously determined optimal concentrations of approximately 10 μg/ml. Residual NK cell activity was blocked in all cytotoxicity assays by addition of a 50-fold excess unlabelled K562 cells to the labeled target cells. For inhibition of the Fas-dependent cytotoxicity, tumor cells were preincubated with an apoptosis-inhibiting anti-human Fas mAb SM1/23 (IgG2a Fab-fragments, Alexa) 10 μg/ml for 30 min at 37°C. The mAb remained present although diluted during the assay. Perforin-dependent cytotoxicity was inhibited by preincubation of CTL21/74 with Concanamycin A (CMA, Sigma) [16] 200 nM for 2 h at 37°C before addition to either IFN-γ-stimulated as well as nonstimulated KLP11 target cells. The CMA remained present in the assay and after the total incubation period of 6 h the viability of CMA treated CTL was assessed using trypan blue and was more than 95% in all cases.
Analysis of Fas-mediated apoptosis was studied after cross-linking of the Fas receptor using a complex of anti-Fas mAb (10 ng/ml) and protein-A (2 μg/ml). KLP11 cells or positive control cells SKW6.4 were incubated with this complex for 20 h at 37°C before DNA fragmentation was determined by FACS analysis after PI staining according to Nicoletti et al. [24].
TNF assay
As a more sensitive alternative for the cytotoxicity assay, we used the WEHI bioassay for TNF-α release (TNF assay) as described [43]. In the case of antibody blocking, the target cells were preincubated with mAb for 30 min at 37°C prior to addition of the CTL.
Enzyme-linked immunoSPOT (ELISPOT) assay and granzyme B ELISA
Effector cells were seeded in precoated 96-well nylon plates (Nalgene Nunc International) at a concentration of 1 × 104 cells per well together with 2 × 104 target cells in 100 μl of IMDM + 5% HS overnight at 37°C. The IFN-γ production of effector cells was measured by an IFN-γ ELISPOT as described elsewhere [10]. The granzyme B release was measured in serial dilutions of the culture supernatant by a granzyme B-ELISA kit (CLB, Amsterdam, The Netherlands), according to the manufacturer’s instructions.
Blocking studies
Recognition of target cells in the TNF-assay, ELISPOT assay, and Granzyme B ELISA was blocked using mAb W6/32, mAb B1.23.2 (anti-HLA-B and anti-HLA-C) [30] mAb 4E (anti-HLA-A29, anti-HLA-B, and anti-HLA-C) [46] and the human mAbs OK2H12 and OK6H12 (IgM, anti-HLA-B21, anti-HLA-B56, anti-HLA-B72, anti-HLA-B35, anti-HLA-B53, weak anti-HLA-B15) (kindly provided by Dr. A. Mulder, Leiden University Medical Center, Leiden, The Netherlands).
Statistical analysis
The IHC evaluation of infiltrating immune cells was statistically analyzed using the Student’s paired t test. Fas/APO-1 induced apoptosis of KLP11 and SKW6.4 cells was analyzed by the Student’s unpaired t test and correlation between HLA class I expression and immune infiltrate was analyzed using the Pearson’s test.
Results
Intratumoral T cell infiltration in situ in a panel of lung carcinomas
We analyzed a panel of 16 NSCLC tumors, both squamous and adenocarcinoma, utilizing CD3- and CD8-specific mAb and multiparameter confocal microscopy for the presence of immune cells. The amount of immune infiltrate, present either in the stroma, in the tumor epithelium, or in both, varied greatly among the 16 NSCLC tumors studied (Table 1). There did not seem to be a major difference in the number of infiltrating immune cells between adenocarcinomas or adenosquamous tumors versus squamous carcinomas. The majority (63%) of the infiltrating cells are CD3+ T cells and 37% are CD3+CD8+ cytotoxic T cells. Although marked immune infiltrate was observed in some tumor samples only a minority of these cells (17%) migrated into the tumor epithelium. When corrected for the surface area of stroma versus tumor, in all tumors a proportionally lower number of immune cells were observed in the tumor epithelium (P ≤.001, Table 1, ratio of cells infiltrating the tumor epithelium versus the stroma always being less than 1.0). Interestingly, the cells that do migrate into tumor epithelium consist of a significantly (P = 0.018) higher percentage of CD3+CD8+ double positive cells (43%) as compared to that in stroma (33%) suggesting that either cytotoxic T cells tend to preferentially migrate into the tumor epithelium or that non-CD3+CD8+ cells have a comparatively poorer ability to infiltrate the tumor epithelium. The mean number of tumor epithelium-infiltrating cells was 185 cells/mm2 (range 21-92 cells/mm2) for CD3+ T cells and 134 cells/mm2 (range 15-68 cells/mm2) for CD3+CD8+ T cells. In contrast, the mean number of stroma-infiltrating cells was 758 cells/mm2 (range 57-,093 cells/mm2) for CD3+ T cells and 423 cells/mm2 (range 25-,059 cells/mm2) for CD3+CD8+ T cells.
Table 1.
Immune infiltrate in a panel of NSCLC tumors
| Tumor number | Tumor type | Tumor epithelium-infiltrating cells (cells/mm2) | Stroma-infiltrating cells (cells/mm2) | Percent tumor/stroma surface | Proportion of cells infiltrating the tumor epithelium/stromab | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | CD3+ | CD3+CD8+ | % CD3+CD8+ | Total | CD3+ | CD3+CD8+ | % CD3+CD8+ | ||||
| 1 | Adeno | 39 | 21 | 15 | 40 | 231 | 57 | 25 | 11 | 38/62 | 0.28 |
| 2 | Adeno | 81 | 56 | 31 | 38 | 632 | 471 | 241 | 38 | 44/56 | 0.16 |
| 3 | Adeno | 119 | 77 | 37 | 31 | 1,448 | 603 | 294 | 20 | 48/52 | 0.09 |
| 4 | Adenosq | 246 | 155 | 88 | 36 | 1,318 | 709 | 409 | 31 | 49/51 | 0.19 |
| 5 | Adenosq | 409 | 257 | 161 | 39 | 1,838 | 903 | 488 | 27 | 32/68 | 0.47 |
| 6 | Squamous | 74 | 48 | 35 | 48 | 855 | 403 | 251 | 29 | 50/50 | 0.09 |
| 7 | Squamous | 90 | 63 | 46 | 51 | 1,473 | 1052 | 669 | 45 | 69/31 | 0.03 |
| 8 | Squamous | 97 | 73 | 15 | 15 | 1,160 | 589 | 94 | 8 | 86/14 | 0.01 |
| 9 | Squamous | 130 | 74 | 31 | 24 | 1,417 | 945 | 512 | 36 | 50/50 | 0.09 |
| 10 | Squamous | 135 | 90 | 57 | 42 | 757 | 498 | 349 | 46 | 55/45 | 0.15 |
| 11 | Squamous | 186 | 104 | 66 | 36 | 753 | 505 | 252 | 33 | 40/60 | 0.37 |
| 12 | Squamous | 256 | 150 | 128 | 50 | 2,296 | 1123 | 754 | 33 | 52/48 | 0.10 |
| 13 | Squamous | 333 | 145 | 86 | 26 | 777 | 413 | 332 | 43 | 36/64 | 0.76 |
| 14 | Squamous | 451 | 330 | 197 | 44 | 1,641 | 1030 | 526 | 32 | 83/17 | 0.06 |
| 15 | Squamous | 508 | 431 | 386 | 76 | 1,124 | 738 | 515 | 46 | 50/50 | 0.45 |
| KLP11 | Squamous | 913 | 892 | 768 | 84 | 2,108 | 2093 | 1059 | 50 | 68/32 | 0.20 |
| Mean cells (cells/mm2) | 254 | 185 | 134 | 43c | 1,239d | 758d | 423d | 33 | 53/47 | 0.22 | |
| Median cells (cells/mm2) | 161 | 97 | 62 | 40 | 1,239 | 656 | 379 | 33 | 50/50 | 0.15 | |
| SD | 228 | 219 | 194 | 18 | 563 | 457 | 258 | 12 | 16/16 | 0.20 | |
aThe tumor samples studied are either adenocarcinomas (adeno), adenosquamous (adenosq), or squamous carcinomas
bThe observed absolute number of tumor epithelium-infiltrating immune cells divided by the absolute number in the stroma after correction for respective surface area of tumor epithelium and stroma
cThe percentage of infiltrating cells that are CD3+CD8+ is significantly (P = 0.018) higher in the tumor epithelium versus the stroma
dThe absolute number of total, CD3+ and CD3+CD8+ infiltrating cells is significantly (P ≤0.001) higher in the stroma versus the tumor epithelium
Lung carcinoma KLP11 with highest number of tumor-infiltrating immune cells
The absolute number of CD3+ and CD3+/CD8+ tumor epithelium-infiltrating cells as well as the percentage of CD3+/CD8+ cells were much higher, both in the tumor (768 CD3+CD8+ T cells/mm2) as well as in the stroma (1,059 CD3+CD8+ T cells/mm2) than in all other tumors (Table 1). T cell infiltrate in KLP11 and six representative squamous and adenocarcinomas is shown in Fig. 1a, c, d and Fig. 1e–j, respectively. Furthermore, KLP11 tumor epithelium infiltrating cells were mainly (84%) CD3+CD8+ of which a minority co-express CD57+, i.e. effector cells with a memory phenotype [approximately 67% were CD3+CD8+CD57- (pink), 17% were CD3+CD8+CD57+ (white/magenta), 13% were CD3+CD8- (red), and only 2% were CD3-CD57+, i.e. NK cells (green)] (see representative picture in Fig. 1c).
Fig. 1.
Immune cell infiltration in NSCLC tumors. In situ staining of KLP11 tumor sections was performed using an immunogold labeling for cytokeratin to distinguish tumor cells from surrounding stroma (a-c and e-j) in combination with either fluorochrome-labeled anti-CD3 (red), anti-CD8 (blue) (in a and e-j), and anti-CD57 (green) (in c) or a combination of anti-CD3 (red), anti-CD8 (green), and anti-granzyme B (blue) (in b). The inset in the right-hand corner (b) shows the single fluorochrome image revealing the granular pattern of granzyme B staining of the three adjacent cells in the square drawn in the multicolor image (b). Immunoperoxidase staining for CD3 shows T cell infiltration in stroma and tumor epithelium of KLP11 tumor (d). Three representative adenocarcinoma (e-g) and three representative squamous cell carcinoma samples (h-j) of a total of 15 other NSCLC specimens studied shows the variability in immune infiltrating cells between different tumor samples and illustrates the relatively dense infiltration of both tumor epithelium as well as surrounding stroma in KLP11 tumor tissue compared to the other NSCLC studied. Original magnifications are 400× in a, c, and d, 1,000× in b, and 200× in e-j
More than 90% of the tumor-infiltrating CD3+CD8+ cells were in an activated state as demonstrated by their expression of granzyme B, a marker of effector function (Fig. 1b). In stromal areas dense infiltration with CD8 positive cells was observed of which approximately 50% were positive for granzyme B, as well.
HLA class I expression in NSCLC tumors
The HLA class I expression was studied in all tumor samples by IHC using mAb HCA2 and HC10. The panel of NSCLC tumors showed a very heterogeneous expression of HLA class I molecules, ranging from a very prominent expression to a very weak or no expression. Interestingly, some tumor tissues showing clear HLA class I expression also contained large areas of cells that lost their HLA class I molecules almost completely. Infiltrating lymphoid cells and stroma stained positive in these areas thus serving as internal positive control for HLA class I expression.
HLA class I expression was normal, i.e. all tumor cells were positive after staining with both HCA2 as well as HC10, in 4/16 (25%) and aberrant, i.e. reduced (HLA class I negative and HLA class I positive tumor cell areas or no membrane staining) in 11/16 (69%), or completely absent (no HLA class I-expressing tumor cells) in 1/16 (6%) of tumors studied. HLA-class I molecule staining by HCA2 (preferentially staining HLA-A) correlated with staining by HC10 (preferentially staining HLA-B/C) in the majority of tumors except for number 14, 15 and KLP11. Downregulation of HLA class I expression did not significantly correlate with immune infiltration although a trend of more immune infiltrate in tumors with higher HLA class I expression is observed as indicated by the ranking assigned to each tumor sample based on positivity after staining with HCA2 and HC10, and number of infiltrating cells/mm2, respectively (Table 2).
Table 2.
Immune infiltration and HLA class I expression in NSCLC tumors
| No. | Typea | HCA2b | HC10b | HCA2c | HC10d | CD3+CD8+e |
|---|---|---|---|---|---|---|
| 1 | Adeno | N | N | 15 | 15.5 | 1 |
| 2 | Adeno | R | R | 9 | 12 | 3.5 |
| 3 | Adeno | R | R | 12 | 10 | 6 |
| 4 | Adenosq | R | R | 5.5 | 7 | 11 |
| 5 | Adenosq | R | R | 8 | 4 | 13 |
| 6 | Squamous | R | R | 4 | 9 | 5 |
| 7 | Squamous | R | A | 2 | 1 | 7 |
| 8 | Squamous | R | R | 3 | 8 | 2 |
| 9 | Squamous | R | R | 5.5 | 2 | 3.5 |
| 10 | Squamous | R | R | 7 | 6 | 8 |
| 11 | Squamous | R | R | 10 | 3 | 9 |
| 12 | Squamous | N | N | 13 | 13 | 12 |
| 13 | Squamous | N | N | 14 | 14 | 10 |
| 14 | Squamous | R | N | 11 | 15.5 | 14 |
| 15 | Squamous | A | R | 1 | 11 | 15 |
| KLP11 | Squamous | N | R | 16 | 5 | 16 |
aAdenocarcinomas (adeno), adenosquamous (adenosq), or squamous carcinomas were analyzed for HLA class I expression by IHC using mAb HCA2 (preferentially staining HLA-A) and HC10 (preferentially staining HLA-B and HLA-C)
bExpression was scored as normal (N, all tumor cells showed membrane expression), reduced (R, heterogeneous expression, both positive and negative tumor cells are present, general reduced expression or low membrane expression), or absent (A, tumor cells do not express HLA class I molecules)
c,d,eThe ranking of the 16 tumor samples with respect to HCA2- and HC10-staining and the degree of CD3+CD8+ cell infiltration into tumor epithelium is depicted. Low numbers represent no or very weak HLA class I expression and high numbers indicate very high expression. The ranking for CD3+CD8+ infiltration is based on the values shown in Table 1
Characterization of NSCLC cell line and tumor KLP11: loss of HLA haplotype
FACS analysis and IHC of lung carcinoma cell line KLP11 established from the tumor of patient KLP11 demonstrated that KLP11 cells express the epithelial cell marker cytokeratin, the carcinoma-related Ags Muc-1, EpCAM-1, Her-2/neu, and overexpress p53. Expression of the same antigens could also be demonstrated in paraffin sections of the primary tumor (data not shown). With respect to proteins involved in apoptosis, KLP11 cells express CD95/Fas/Apo-1 as assessed by FACS analysis using CD95-specific mAb. The RNAse protection assay revealed that KLP11 cells express mRNA for the anti-apoptotic proteins XIAP, c-IAP-1, c-IAP-2, and survivin. Expression of these anti-apoptotic molecules was confirmed at the protein level by IHC using specific mAb (data not shown). Other important modulators of apoptosis, including caspase-8, FADD and TRADD, involved in receptor-mediated apoptosis, were expressed in KLP11 cells at the mRNA level as well. IHC or WB revealed expression of caspase-8 and caspase-9, weak expression of caspase-3 and absence of caspase-7 and of the protease inhibitor PI-9 (data not shown).
The obtained cell line KLP11 expresses HLA class I molecules, as determined by FACS analysis using anti-HLA-A, anti-HLA-B and anti-HLA-C mAb (W6/32), anti-HLA-A11 and anti-HLA-A24 mAb, and upregulation of total HLA class I and more specifically HLA-A11, but not HLA-A24, could be obtained by incubation of KLP11 cells with IFN-γ (Fig. 2).
Fig. 2.
HLA-A24 expression is lost in KLP11 NSCLC cell line and in KLP11 tumor in situ. Total HLA class I-, HLA-A11-, and HLA-A24-expression were determined by FACS analysis on autologous EBV transformed B cells (KLP11-EBV, a), nonstimulated NSCLC tumor cell line KLP11 cells (b) and KLP11 cells preincubated for 48 h with 100 U/ml IFN-γ (c). Expression of HLA-A24 was not detectable by FACS analysis on nonstimulated or IFN-γ pretreated KLP11 (right FACS in b and c, respectively) whereas HLA class I and HLA-A11 are constitutively expressed on KLP11 cells and increased by IFN-γ stimulation (left and middle FACS in b and c, respectively). KLP11-EBV shows abundant expression of HLA class I molecules and express both HLA-A11 as well as HLA-A24 (a). Immunohistochemical analysis of KLP11 tumor tissue reveals a similar loss of HLA-A24 expression compared to positive staining for HLA-A11, whereas normal lung tissue of patient KLP11 expresses HLA-A11 as well as HLA-A24 (d, original magnification 200×)
Comparison of the PCR/oligotyping results of tumor cells and PBMC confirmed the loss of a complete HLA class I haplotype; KLP11 cells were HLA-A*1101, B*5701, Cw*0602, DRB1*0701, DRB4*01030102N, DQB1*0303, whereas the patient’s PBMC were HLA-A*1101, A*2402/01, B*0702, B*5701, Cw*0602, Cw*0702, DRB1*0701, DRB1*1302, DRB3*0301, DRB4*01030102N, DQA1*0102, DQA1*0201, DQB1*0303, DQB1*0604, DPB1*0301, DPB1*0402. FACS analysis indicated that KLP11 tumor cells express only HLA-A11, whereas the patient’s corresponding EBV-B cells were shown to express both HLA-A11 and HLA-24 (Fig. 2, upper panel), underscoring HLA class I haplotype loss.
In addition, paraffin-embedded tissue samples of KLP11 tumor were immunohistochemically stained with HLA-A11 and HLA-A24-specific mAb (0284HA and 0041HA, respectively) and revealed expression of HLA-A11, but not of HLA-A24 in the KLP11 tumor tissue, whereas normal lung epithelium present in the same tissue section expressed both HLA-A11 as well as HLA-A24 (Fig. 2, lower panel).
Karyotyping of KLP11 lung carcinoma cells
Karyotyping of lung carcinoma cell line KLP11 was performed by COBRA-FISH analysis to confirm the haplotype loss already observed by PCR/oligotyping for HLA class I and II molecules. The obtained karyogram showed that for most chromosomes three copies were present in the cell line (Fig. 3). Moreover, multiple aberrant chromosomes were observed in the karyogram including a nonreciprocal translocation in the p-arm of one copy of chromosome 6 with an unclassified chromosome (repeat sequences) and in addition a translocation of the p-arm of chromosome 6 with chromosome 22, while another copy of chromosome 6 is still intact (Fig. 3). Translocation in the 6p21 region that encodes HLA molecules seems likely, which explains the genetic loss of one HLA haplotype observed by HLA PCR/oligotyping. The complete karyogram description is as follows: modal range 60-5 <3n>XX, der(1)t(1;15), i(2)q(10), del(2p), i(3)(p10), i(3)(q10), der(3)t(3;20)x2, der(5)t(5;15), -, der(6)t(6;?),+7,+8, -9x2,+10,+11, i(11)(q10), -3, -5x2, i(15)(q10), -7, -8, der(18)t(9;18), -9, -0, -1, -2, der(22)t(6;22), der(22)t(19;22). Analysis of 15 metaphases per passage of various early, sequential passages, i.e. passage 3, 7, 9, and a later passage 35 of the primary tumor cell cultures of KLP11 showed that the translocation at chromosome 6 was present in all passages examined, suggesting that the translocation already occurred in vivo. Aberrations that were stable throughout all karyotyped passages include der(1)t(1;15), i(3)(p10), i(3)(q10), der(3)t(3;20)x2, der(6)t(6;?), i(11)(q10), der(18)t(9;18), and der(22)t(6;22).
Fig. 3.

Karyotype of short-term culture of NSCLC cell line KLP11. Chromosomes in a metaphase spread of KLP11 culture at passage 11 are differentially painted by COBRA-FISH. The superimposed, pseudocolor images of the fluorophores (Cy3/red, DEAC/green, and Cy5/blue) used to ratio-label whole chromosomes are depicted (a). The first binary label differentiates between the identically ratio-labeled odd and even chromosomes (b) and the second binary label distinguishes p and q arms (c). Note that the second binary label is used to stain all q arms except for chromosomes 4 and 7 where it is used to stain the p arm
Generation of HLA class I-restricted antitumor cytotoxic T-cells
Specific lysis of unstimulated and IFN-γ-stimulated KLP11 lung carcinoma cells by bulk lymphocyte cultures of 40 and 70%, respectively, was detected at an E/T ratio of 30. The specific lysis could be blocked by anti-HLA class I mAb W6/32, indicating that recognition is HLA class I restricted. The responder cells did not lyse autologous EBV-B cells of KLP11 indicating that lytic activity was tumor antigen specific. After limiting dilution 17 individual clones could be selected and one CD3+CD8+ clone (CTL 21/74) expressing TCR-Vβ1, as determined by FACS analysis (data not shown), was studied in more detail and shown to release TNF-α, IFN-γ, and granzyme B (Fig. 4a–c) upon recognition of the autologous tumor cells. CTL reactivity against KLP11 lung carcinoma cells was inhibited by mAb W6/32 and by OK2H12 indicating HLA class I- and HLA-A11-restriction (Fig. 4). MAb 4E that is of the same isotype as W6/32 did not block recognition of KLP11 cells nor did the HLA antigen-specific control mAb OK6H12 that does not bind to HLA-A11 (Fig. 4a).
Fig. 4.

Reactivity of CTL clone 21/74 is HLA class I- and HLA-A11-restricted and mediated predominantly via the perforin-granzyme B pathway. Tumor cell line KLP11 was incubated with mAb against MHC class I-A, MHC class I-B, and MHC class I-C (W6/32), HLA-A11 (OK2H12), two different anti-HLA-B, and -C mAb (BB1.23.2 and 4E) or control mAb (OK6H12) as indicated, prior to addition of CTL21/74. Reactivity was measured by TNF-release (a), formation of IFN-γ-secreting cells in Elispot-assay (b) and granzyme-B release by Elisa (c). Representative experiments performed in triplicate wells are shown. KLP11 cells were incubated with a complex of anti-Fas/CD95 mAb (APO-1.1) and protein A or control medium for 20 h at 37°C before apoptosis was measured by FACS analysis using the Nicoletti-DNA fragmentation assay [24] (d). The positive control Fas-expressing cell line SKW6.4 was incubated with anti-Fas/protein A complexes or control medium and analyzed simultaneously. The mean percentage and standard deviation of apoptotic cells showing DNA fragmentation of seven and four independent experiments for KLP11 and SKW6.4 cells, respectively, is depicted (d). By Student’s t test a significant increase in apoptosis was obtained in KLP11 cells **(P ≤0.005, n = 7) and SKW6.4 cells *(P ≤0.05, n = 4) after anti-Fas/protein A incubation. The percentage specific lysis of 51Cr-labeled, IFN-γ-stimulated KLP11 target cells of a representative 4 h cytotoxicity experiment performed in triplicate and measured at different E/T ratios from 30:1, 10:1, 3:1, 1:1 through 0.3:1 is shown. Specific lysis of IFN-γ-stimulated (e) as well as nonstimulated (data not shown) target cell KLP11 was almost completely abolished after preincubation of CTL21/74 with CMA. CMA alone did not affect CTL21/74 viability (>95%) as assessed by trypan blue exclusion (data not shown). IHC of KLP11 tumor sections using M30 mAb detects apoptotic tumor cells in vivo (F, magnification 400×)
Reactivity of this CTL was tested against a broad panel of epithelial tumor cell lines consisting of three other cell lines that match with KLP11 cells only for HLA-A11, two cell lines that match for HLA-B57, one cell line that matches for HLA-Cw6, and one tumor cell line that matches for HLA-A24, as well as B57 and Cw6. Reactivity of CTL21/74 was also tested against melanoma, lung, and other epithelial tumor cell lines without matching HLA class I alleles. No HLA-A11 positive lung carcinoma cell lines were available to test for recognition by this CTL clone. Two of the three tumor cell lines that match with KLP11 cells for HLA-A11, i.e. one breast carcinoma ZR75.1 and one ovarian carcinoma COV504 cell line, were recognized by CTL21/74. In a cytotoxicity assay specific lysis of ZR75.1 as well as COV504 by CTL21/74 was approximately 20% at an E/T ratio of 30, whereas at the same E/T ratio lysis of KLP11 by CTL21/74 was about threefold higher. TNF-α release by CTL21/74 in response to ZR75.1 and COV504 was almost 75% of that found in response to KLP11. All other target cell lines were not recognized by CTL 21/74 (i.e. specific lysis at an E/T ratio of 30 was in all cases less than 5% and CTL21/74 did not produce TNF-α in response to these targets). By FACS analysis CTL 21/74 was shown to express NKG2D (mean fluorescence intensity was 9.6 times higher than that of the negative control) but none of the NK inhibitory receptors studied (data not shown).
Mechanism of lysis of KLP11 tumor cells following interaction with CTL
The Fas-mediated apoptosis pathway was functional in KLP11 as indicated by the fact that incubation of KLP11 cells with anti-Fas mAb/protein-A, resulted in 47% apoptosis after 20 h of incubation compared to 15% of spontaneous apoptosis (Fig. 4d), measured by PI staining of total DNA content and FACS analysis (Nicoletti assay [24]). As a control, apoptosis was induced in 67.0% of the Fas-expressing SKW6.4 cells after 20 h of incubation with anti-Fas mAb/protein-A as compared to 14.8% of spontaneous apoptosis (Fig. 4d). However, preincubation of KLP11 cells with anti-Fas mAb SM1/23 that blocks apoptosis induction did not inhibit CTL-mediated lysis of KLP11 cells in a cytotoxicity assay (data not shown). Lysis of IFN-γ stimulated (Fig. 4e) as well as nonstimulated (data not shown) KLP11 cells could almost completely be blocked by preincubation of CTL with the perforin inhibitor CMA [16] indicating that most if not all cytolytic action of the CTL against KLP11 could be attributed to the exocytosis pathway-mediated apoptosis (Fig. 4e).
In vivo killing of KLP11 cells could be detected by IHC using the M30 mAb that recognizes a neo-epitope of cytokeratin-18 that appears upon induction of apoptosis in epithelial cells (Fig. 4f).
Discussion
Analysis of a panel of 16 squamous and adenocarcinoma lung cancer samples revealed aberrant HLA class I antigen expression in 75% of the NSCLC tumors analyzed and a highly variable amount of T cell infiltrate in stroma, tumor epithelium, or both. In the patient with the highest T cell infiltration in tumor epithelium (KLP11), a complete HLA class I haplotype loss was observed in the tumor cells. The number of infiltrating CD3+CD8+ granzyme B-positive T cells was extremely high in this tumor as compared to the other tumors and the relatively high percentage of CD3+CD8+ double positive T cells that was found in the tumor epithelium suggests that this resulted of preferential migration of cytotoxic T cells to this site. Interestingly, we were able to isolate a tumor antigen-specific cytotoxic T cell clone that was restricted by the remaining HLA-A11 molecule from this patient’s PBMC after culturing them with the autologous tumor cells.
The involvement of chromosomal abnormalities in the development of NSCLC has been appreciated but only recently a more accurate karyotyping and elucidation of chromosomal abnormalities has been achieved using elegant cytogenetic techniques like M-FISH and SKY analysis and the COBRA-FISH technique, used by us. Compared to conventional Giemsa-banding techniques multicolor FISH based analysis is suited to obtain informative results in case of complex chromosomal rearrangements when no a priori knowledge about specific abnormalities exists. Recently, Sy et al. analyzed karyograms of squamous cell lung carcinomas and observed multiple chromosomal aberrations (ranging in number from 4 to 26) in 11/21 (52%) of the short-term primary NSCLC cultures studied [39]. The pattern of defects in KLP11 differs from the pattern reported to occur with high frequency in squamous cell carcinoma. Involvement of chromosome 6, mainly nonreciprocal translocations, was observed in 19% of the squamous cell carcinomas but the der(6) t(6;22) defect, that may underlie HLA class I haplotype loss, was not reported in any of these tumors [2, 39].
Aberrant HLA class I antigen expression has been observed at high frequencies in many different tumor types including melanoma and colon (reviewed in [9]). The presence of tumor infiltrating immune cells has been implicated as a favorable prognostic factor in certain solid tumor types [7, 18, 27, 35, 47] or as unfavorable [8, 41] or of no significance, e.g. in NSCLC [40] and metastatic breast cancer [11]. Immune cells infiltrating the tumor epithelium, i.e. directly interacting with tumor cells are shown to contribute to a survival benefit in colorectal cancer patients [21] indicating that exact tumor localization of immune cells affects the prognostic value of infiltrate analysis. Downregulation of HLA-A expression has been described to correlate with CD8+ T cell infiltration and with disease free survival in colorectal cancer patients [22, 34]. It was suggested that selection of HLA class I loss variants had occurred that maintained their capacity to attract various immune cells but that the beneficial effect on disease free survival could be attributed to NK cells. Similar findings were described recently in NSCLC [29]. However, the immune cells infiltrating into the tumor epithelium of KLP11 were not NK cells but functional granzyme B producing CD3+CD8+ effector T cells. Most studies only evaluate the quantity and type of infiltrating immune cells but not their actual activation status, which might be hampered by production of immunosuppressive factors by the tumor itself or by defective effector mechanisms, e.g. loss of Fas expression on tumor cells or Fas gene alterations, as are frequently observed in NSCLC [4, 19]. Although KLP11 was shown to express a functional Fas receptor (CD95, Apo-1), CTL-mediated lysis of KLP11 cells could not be inhibited by preincubation of KLP11 cells with apoptosis inhibiting anti-Fas mAb. Furthermore, mRNA and protein expression of the four human IAP-family members XIAP, cIAP-1, cIAP-2 and survivin [1, 6, 33] in KLP11 apparently did not result in resistance of KLP11 cells to CTL-mediated apoptosis, in vitro.
While most antitumor CTL clones have been obtained from melanoma patients and numerous antigens have been cloned from melanoma cells this is not the case for NCSLC. We obtained CTL clone 21/74 from PBMC of lung cancer patient KLP11 after autologous MLTC. This CTL clone recognized a tumor antigen that was presented by the remaining HLA-A11 molecule expressed by the tumor sample of KLP11 as well as by the cell line. Although CTL 21/74 releases both TNF-α and IFN-γ as well as granzyme B upon interaction with KLP11 tumor cells, the almost complete (90% inhibition of KLP11 cell death) inhibition of cytotoxicity of the CTL following exposure to CMA [16] indicates that exocytosis of perforin and granzymes is the main effector mechanism used by this CTL, in vitro. In contrast to the findings in large B-cell lymphomas where high frequencies of granzyme B expressing activated CTL correlate with tumor cell expression of the granzyme B antagonist protease inhibitor PI-9 and poor prognosis [23], PI-9 was not detected in the KLP11 tumor tissue suggesting that granzyme B positive tumor infiltrating T cells may be effective in killing KLP11 tumor in situ. In this respect it is of interest that apoptotic cells could be identified in KLP11 sections stained with HE or M30 mAb, specific for an apoptosis-induced neo-epitope of cytokeratin-18 [5] and that the CD8+ T lymphocytes infiltrating into KLP11 tumor epithelium were indeed shown to be functional effector T cells expressing granzyme B.
CD8+ CTL has been described to express NK inhibitory receptors that may be involved in the differential recognition of tumor variants with an HLA haplotype loss versus parental tumor cells with complete HLA class I expression [14]. However, a similar phenomenon can most likely be excluded for the recognition of KLP11 cells by CTL21/74 since this CTL expresses no known NK inhibitory receptor molecules.
Loss of HLA class I antigens in the presence of an ongoing immune response has never before been reported for this tumor type and indicates that loss of an HLA class I haplotype does not necessarily render tumor cells nonimmunogenic. On the contrary, the KLP11 tumor is heavily infiltrated with functional granzyme B positive CD8+ T cells restricted by one of the remaining HLA class I alleles. Therefore, we conclude that T cell-mediated immunotherapy, possibly in combination with standard treatment modalities, may well be a successful therapeutic strategy for tumor types that frequently show MHC class I aberrations as is the case in lung cancer. However, given the frequent complete loss of HLA class I molecule expression it is of importance to analyze the HLA class I expression in a tumor biopsy before initiating T cell-mediated immunotherapy in NSCLC. Furthermore, this is to our knowledge the first study to report infiltration of granzyme B expressing activated CD3+CD8+ T cells in lung carcinoma that may be associated with a beneficial clinical outcome.
Acknowledgments
Financial support for this study was granted by the Dutch Cancer Foundation, RUL19990-2027. We thank Prof. C.J M. Melief for critical reading of the manuscript.
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